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L3_069_049G1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 238 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_43_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..79)
DNA (78bp) protein (26aa)
pyrG_1; CTP synthase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNF18.;"
CTP synthase n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2LR00_SERFO
L3_069_049G1_scaffold_43_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(307..1098)
DNA (792bp) protein (264aa)
mazG; nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.19)
Nucleoside triphosphate pyrophosphohydrolase n=874 Tax=Enterobacteriaceae RepID=MAZG_ECO57
Protein MazG {ECO:0000313|EMBL:EFU36608.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L3_069_049G1_scaffold_43_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1169..1504)
DNA (336bp) protein (112aa)
PemK protein 1 n=286 Tax=Escherichia coli RepID=A7ZQM5_ECO24
chpA; toxin ChpA
Toxin MazF {ECO:0000313|EMBL:EZE22649.1}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
L3_069_049G1_scaffold_43_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1504..1752)
DNA (249bp) protein (83aa)
SpoVT / AbrB like domain protein n=7 Tax=Escherichia coli RepID=H5PNT2_ECOLX
antitoxin MazE
Antitoxin MazE {ECO:0000313|EMBL:KDX24735.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L3_069_049G1_scaffold_43_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1830..4064)
DNA (2235bp) protein (745aa)
GTP pyrophosphokinase n=1188 Tax=Bacteria RepID=RELA_ECO57
relA; (p) ppGpp synthetase I/GTP pyrophosphokinase
GTP pyrophosphokinase {ECO:0000313|EMBL:EOW01508.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L3_069_049G1_scaffold_43_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4112..5413)
DNA (1302bp) protein (434aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=106 Tax=Enterobacteriaceae RepID=A7ZQM8_ECO24
rumA; 23S rRNA 5-methyluridine methyltransferase
L3_069_049G1_scaffold_43_7
Shimwellia blattae, Shimwellia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5470..8106
DNA (2637bp) protein (879aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=630626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shimwellia.;" source="Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC; 105725 / CDC 9005-74) (Escherichia blattae).;"
Hybrid sensory histidine kinase BarA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BE95_CITFR
barA; sensor histidine kinase/response regulator BarA
L3_069_049G1_scaffold_43_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8338..9678)
DNA (1341bp) protein (447aa)
Glucarate dehydratase {ECO:0000313|EMBL:EHX24537.1}; EC=4.2.1.40 {ECO:0000313|EMBL:EHX24537.1};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Glucarate dehydratase n=1 Tax=Escherichia coli KTE210 RepID=L3E4V2_ECOLX
(D)-glucarate dehydratase 1
L3_069_049G1_scaffold_43_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9699..11039)
DNA (1341bp) protein (447aa)
Glucarate dehydratase-like protein {ECO:0000313|EMBL:EII24892.1}; EC=4.2.1.- {ECO:0000313|EMBL:EII24892.1};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Glucarate dehydratase n=94 Tax=Enterobacteriaceae RepID=A7ZQN1_ECO24
glucarate dehydratase
L3_069_049G1_scaffold_43_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11041..12393)
DNA (1353bp) protein (451aa)
Glucarate transporter n=839 Tax=Enterobacteriaceae RepID=E2QQN5_ECOLX
D-glucarate transporter GudP
Putative glucarate transporter {ECO:0000313|EMBL:EKJ13518.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L3_069_049G1_scaffold_43_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12828..13277)
DNA (450bp) protein (150aa)
Flavodoxin family protein n=8 Tax=Escherichia coli RepID=H5FI55_ECOLX
Flavodoxin {ECO:0000313|EMBL:ESA73032.1}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
yqcA; flavodoxin
L3_069_049G1_scaffold_43_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13295..14077)
DNA (783bp) protein (261aa)
truC; tRNA pseudouridine synthase C (EC:4.2.1.70)
Pseudouridine synthase n=277 Tax=Enterobacteriaceae RepID=J7R4X4_ECOLX
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:EMX36534.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L3_069_049G1_scaffold_43_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14077..14406)
DNA (330bp) protein (110aa)
Uncharacterized protein YqcC n=470 Tax=Enterobacteriaceae RepID=YQCC_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD64474.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_069_049G1_scaffold_43_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..15573)
DNA (546bp) protein (182aa)
Protein Syd n=912 Tax=Enterobacteriaceae RepID=SYDP_ECO24
Syd family protein
Protein Syd {ECO:0000256|HAMAP-Rule:MF_01104, ECO:0000256|SAAS:SAAS00064630}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_069_049G1_scaffold_43_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15641..16489
DNA (849bp) protein (283aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=290 Tax=Enterobacteriaceae RepID=QUEF_ECO24
queF; 7-cyano-7-deazaguanine reductase
L3_069_049G1_scaffold_43_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16601..17965
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57
ygdH; rossmann fold nucleotide-binding protein
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_069_049G1_scaffold_43_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18522..19811
DNA (1290bp) protein (430aa)
Serine transporter n=958 Tax=Bacteria RepID=SDAC_ECO57
serine transporter
Serine transporter {ECO:0000313|EMBL:EIH12949.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
L3_069_049G1_scaffold_43_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19869..21236
DNA (1368bp) protein (456aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:KEN54462.1}; EC=4.3.1.17 {ECO:0000313|EMBL:KEN54462.1};; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C3.;"
L-serine dehydratase 2 n=366 Tax=Enterobacteriaceae RepID=A7ZQP1_ECO24
sdaB; L-serine deaminase II
L3_069_049G1_scaffold_43_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21258..22103
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
Flap endonuclease Xni n=171 Tax=Enterobacteriaceae RepID=C6EJ73_ECOBD
flap endonuclease-like protein
L3_069_049G1_scaffold_43_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22158..23306)
DNA (1149bp) protein (383aa)
L-1,2-propanediol oxidoreductase n=5 Tax=Escherichia coli RepID=I4PDE3_ECOLX
1,2-propanediol oxidoreductase {ECO:0000313|EMBL:KKB22202.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-1,2-propanediol oxidoreductase
L3_069_049G1_scaffold_43_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23334..23981)
DNA (648bp) protein (216aa)
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L-fuculose-1-phosphate aldolase n=233 Tax=Enterobacteriaceae RepID=B6I6J8_ECOSE
fucA; L-fuculose-1-phosphate aldolase
L3_069_049G1_scaffold_43_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24528..25844
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=585 Tax=Enterobacteriaceae RepID=FUCP_ECOLI
L-fucose transporter
H+ symporter permease {ECO:0000313|EMBL:KDX20892.1}; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
L3_069_049G1_scaffold_43_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25877..27652
DNA (1776bp) protein (592aa)
fucI; L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L-fucose isomerase n=114 Tax=Escherichia coli RepID=FUCI_ECO55
L3_069_049G1_scaffold_43_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27761..29179
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
L-fuculokinase n=306 Tax=Enterobacteriaceae RepID=B6I6K1_ECOSE
fucK; L-fuculokinase
L3_069_049G1_scaffold_43_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29181..29603
DNA (423bp) protein (141aa)
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
fucU; fucose operon protein FucU
L3_069_049G1_scaffold_43_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29661..30392
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI
L-fucose operon activator
Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:EII24774.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_069_049G1_scaffold_43_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30436..31536)
DNA (1101bp) protein (367aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Ribosomal RNA large subunit methyltransferase M n=818 Tax=Enterobacteriaceae RepID=RLMM_ECO24
ygdE; putative RNA 2'-O-ribose methyltransferase
L3_069_049G1_scaffold_43_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31529..31924)
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
L3_069_049G1_scaffold_43_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31943..32860)
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator n=1321 Tax=Enterobacteriaceae RepID=GCVA_ECO57
gcvA; positive regulator of gcv operon
LysR family transcriptional regulator {ECO:0000313|EMBL:EFE61653.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_069_049G1_scaffold_43_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33211..33438)
DNA (228bp) protein (76aa)
Uncharacterized protein n=116 Tax=Enterobacteriaceae RepID=D2NLW6_ECOS5
ygdI; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMX83064.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
Displaying items 1-30 of 238 in total

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