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L3_069_049G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_68_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..129
DNA (129bp) protein (43aa)
thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Varibaculum cambriense RepID=UPI0003B4719A
Molybdenum cofactor biosynthesis protein MoeB2 {ECO:0000313|EMBL:ETI81974.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

132..1496
DNA (1365bp) protein (455aa)
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:ETI81975.1}; EC=2.10.1.1 {ECO:0000313|EMBL:ETI81975.1};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
molybdopterin biosynthesis protein MoeA n=1 Tax=Varibaculum cambriense RepID=UPI0003B44BC8
moeA; molybdopterin biosynthesis protein MoeA
L3_069_049G1_scaffold_68_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1553..2080
DNA (528bp) protein (176aa)
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Varibaculum cambriense RepID=UPI0003B49525
Molybdenum (Mo2+) cofactor biosynthesis enzyme {ECO:0000313|EMBL:ETI81977.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
moaC; Molybdenum cofactor biosynthesis protein
L3_069_049G1_scaffold_68_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2073..2693
DNA (621bp) protein (207aa)
molybdopterin-guanine dinucleotide biosynthesis protein MobA n=1 Tax=Varibaculum cambriense RepID=UPI0003B65169
Uncharacterized protein {ECO:0000313|EMBL:ETI81978.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_68_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2694..3245)
DNA (552bp) protein (184aa)
molybdenum cofactor biosynthesis protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B556F3
Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:ETI81979.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
moaB; Molybdenum cofactor biosynthesis protein
L3_069_049G1_scaffold_68_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3556..4764
DNA (1209bp) protein (403aa)
MFS transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B5BE3A
Uncharacterized protein {ECO:0000313|EMBL:ETI81980.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nitrate/nitrite transporter
L3_069_049G1_scaffold_68_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4839..8540
DNA (3702bp) protein (1234aa)
narG; Nitrate reductase subunit alpha (EC:1.7.99.4)
nitrate reductase A subunit alpha n=1 Tax=Varibaculum cambriense RepID=UPI0003B4A751
Uncharacterized protein {ECO:0000313|EMBL:ETI81981.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8582..10075
DNA (1494bp) protein (498aa)
nitrate reductase subunit beta n=1 Tax=Varibaculum cambriense RepID=UPI0003B5BFCB
Uncharacterized protein {ECO:0000313|EMBL:ETI81982.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
narY; nitrate reductase Z subunit beta
L3_069_049G1_scaffold_68_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10072..10797
DNA (726bp) protein (242aa)
respiratory nitrate reductase subunit delta n=1 Tax=Varibaculum cambriense RepID=UPI0003B3AD90
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:ETI81983.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_68_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10802..11578
DNA (777bp) protein (259aa)
narI; nitrate reductase (EC:1.7.99.4)
nitrate reductase subunit gamma n=1 Tax=Varibaculum cambriense RepID=UPI0003B52B6B
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:ETI81984.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11789..12193
DNA (405bp) protein (135aa)
MerR family transcriptional regulator n=1 Tax=Varibaculum cambriense RepID=UPI0003B61A89
TOBE protein {ECO:0000313|EMBL:ETI81985.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
MerR family transcriptional regulator
L3_069_049G1_scaffold_68_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12190..12987
DNA (798bp) protein (266aa)
molybdate-binding protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3FF3B
Uncharacterized protein {ECO:0000313|EMBL:ETI81986.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
modA; molybdate ABC transporter substrate-binding protein
L3_069_049G1_scaffold_68_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12996..14585
DNA (1590bp) protein (530aa)
molybdenum ABC transporter permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B79A21
Uncharacterized protein {ECO:0000313|EMBL:ETI81987.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
molybdenum ABC transporter inner membrane protein
L3_069_049G1_scaffold_68_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14683..15825
DNA (1143bp) protein (381aa)
thiamine-monophosphate kinase (EC:2.7.4.16)
thiamine monophosphate kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B52120
Uncharacterized protein {ECO:0000313|EMBL:ETI81988.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15849..16040)
DNA (192bp) protein (64aa)
UPI0003D6965D related cluster n=1 Tax=unknown RepID=UPI0003D6965D
Uncharacterized protein {ECO:0000313|EMBL:ETI81989.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16305..17489
DNA (1185bp) protein (395aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B61C7E
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ETI81990.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_68_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17493..17894
DNA (402bp) protein (134aa)
methionine-R-sulfoxide reductase (EC:1.8.4.11)
methionine sulfoxide reductase n=1 Tax=Varibaculum cambriense RepID=UPI0003B769CE
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:ETI81991.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17896..18729
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B740BF
Uncharacterized protein {ECO:0000313|EMBL:ETI81992.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_19
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18742..19287
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JI12_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFW09874.1}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
hypothetical protein
L3_069_049G1_scaffold_68_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19657..19908
DNA (252bp) protein (84aa)
transglycosylase n=1 Tax=Varibaculum cambriense RepID=UPI0003B71F08
Uncharacterized protein {ECO:0000313|EMBL:ETI81994.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transglycosylase
L3_069_049G1_scaffold_68_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20450..21367)
DNA (918bp) protein (306aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B62C2A
L3_069_049G1_scaffold_68_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21404..22393
DNA (990bp) protein (330aa)
cation diffusion facilitator family transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B525B4
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ETI81997.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
cadmium, cobalt and zinc/H(+)-K(+) antiporter family protein
L3_069_049G1_scaffold_68_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22652..24481)
DNA (1830bp) protein (610aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pckG; phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
phosphoenolpyruvate carboxykinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B6D0CE
L3_069_049G1_scaffold_68_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24774..25538
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4FE5B
Uncharacterized protein {ECO:0000313|EMBL:ETI81999.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_68_25
unknown

Not on your lists

25795..26832
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B377FE
L3_069_049G1_scaffold_68_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26829..28052
DNA (1224bp) protein (408aa)
VirB11 protein of the type IV secretion system n=1 Tax=Varibaculum cambriense RepID=UPI0003B5DEF3
Uncharacterized protein {ECO:0000313|EMBL:ETI82000.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
type II secretion system protein E
L3_069_049G1_scaffold_68_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28049..28723
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B556A4
Uncharacterized protein {ECO:0000313|EMBL:ETI82001.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_68_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28726..29253
DNA (528bp) protein (176aa)
type II secretion protein F n=1 Tax=Varibaculum cambriense RepID=UPI0003B3A469
Uncharacterized protein {ECO:0000313|EMBL:ETI82002.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
type II secretion system protein
L3_069_049G1_scaffold_68_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29250..30692)
DNA (1443bp) protein (481aa)
amino acid:cation symporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B5DA84
Uncharacterized protein {ECO:0000313|EMBL:ETI82003.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
branched-chain amino acid ABC transporter substrate-binding protein
L3_069_049G1_scaffold_68_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30852..31553
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4610E
Uncharacterized protein {ECO:0000313|EMBL:ETI82004.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Displaying items 1-30 of 97 in total

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