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L3_069_049G1_scaffold_76

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Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_76_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(178..1125)
DNA (948bp) protein (316aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
tRNA-dihydrouridine synthase n=118 Tax=Escherichia coli RepID=B6I8J0_ECOSE
tRNA-dihydrouridine synthase C
L3_069_049G1_scaffold_76_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1364..1762
DNA (399bp) protein (133aa)
UPF0299 membrane protein YohJ n=6 Tax=Escherichia coli RepID=F4SMR9_ECOLX
hypothetical protein
UPF0299 membrane protein YohJ {ECO:0000256|HAMAP-Rule:MF_01144}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_069_049G1_scaffold_76_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1759..2454
DNA (696bp) protein (232aa)
Inner membrane protein YohK n=1002 Tax=Enterobacteriaceae RepID=YOHK_ECOLI
LrgB family protein
Uncharacterized protein {ECO:0000313|EMBL:EID67126.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_069_049G1_scaffold_76_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2584..3468
DNA (885bp) protein (295aa)
Cytidine deaminase {ECO:0000256|HAMAP-Rule:MF_01558, ECO:0000256|PIRNR:PIRNR006334}; EC=3.5.4.5 {ECO:0000256|HAMAP-Rule:MF_01558, ECO:0000256|PIRNR:PIRNR006334};; Cytidine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01558}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
Cytidine deaminase n=473 Tax=Enterobacteriaceae RepID=CDD_ECO55
Cytidine deaminase
L3_069_049G1_scaffold_76_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3618..4337
DNA (720bp) protein (240aa)
Protein SanA n=1318 Tax=Bacteria RepID=SANA_ECO57
hypothetical protein
Protein sanA {ECO:0000313|EMBL:ELE43044.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
L3_069_049G1_scaffold_76_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4340..4579
DNA (240bp) protein (80aa)
Uncharacterized protein YeiS n=1320 Tax=Enterobacteriaceae RepID=YEIS_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA86057.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_069_049G1_scaffold_76_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4898..6136
DNA (1239bp) protein (413aa)
Oxidoreductase yeiT n=103 Tax=Enterobacteriaceae RepID=D6HYQ5_ECOLX
yeiT; putative oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ESA60657.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_069_049G1_scaffold_76_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6130..7365
DNA (1236bp) protein (412aa)
Predicted oxidoreductase n=237 Tax=Enterobacteriaceae RepID=C8TU71_ECO26
yeiA; dihydropyrimidine dehydrogenase
Putative dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:BAG77938.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
L3_069_049G1_scaffold_76_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7436..8446)
DNA (1011bp) protein (337aa)
Galactoside transport system permease protein MglC n=709 Tax=Enterobacteriaceae RepID=MGLC_ECOLI
mglC; Galactoside transport system permease protein mglC
Beta-methylgalactoside transporter permease {ECO:0000313|EMBL:KDV30453.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
L3_069_049G1_scaffold_76_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8462..9982)
DNA (1521bp) protein (507aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Galactose/methyl galactoside import ATP-binding protein MglA n=325 Tax=Enterobacteriaceae RepID=MGLA_ECOLI
ABC transporter
L3_069_049G1_scaffold_76_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10043..11041)
DNA (999bp) protein (333aa)
D-galactose-binding periplasmic protein n=1062 Tax=Enterobacteriaceae RepID=DGAL_ECOL6
mglB; galactose ABC transporter periplasmic galactose-binding protein
Methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB {ECO:0000313|EMBL:EJE68609.1}; TaxID=1165944 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H8 str. CVM9634.;"
L3_069_049G1_scaffold_76_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11321..12361)
DNA (1041bp) protein (347aa)
Galactose operon repressor n=189 Tax=Enterobacteriaceae RepID=B6I8K1_ECOSE
galS; DNA-binding transcriptional regulator GalS
Bacterial regulatory s, lacI family protein {ECO:0000313|EMBL:KEL86674.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L3_069_049G1_scaffold_76_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12503..13660)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=46 Tax=Enterobacteriaceae RepID=B7M4Z8_ECO8A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK25199.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L3_069_049G1_scaffold_76_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13677..14345)
DNA (669bp) protein (223aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
GTP cyclohydrolase 1 n=1414 Tax=Enterobacteriaceae RepID=GCH1_ECO24
folE; GTP cyclohydrolase FolE
L3_069_049G1_scaffold_76_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14603..15439
DNA (837bp) protein (279aa)
S-formylglutathione hydrolase (EC:3.1.2.12)
S-formylglutathione hydrolase {ECO:0000313|EMBL:KEN97248.1}; EC=3.1.2.12 {ECO:0000313|EMBL:KEN97248.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
S-formylglutathione hydrolase YeiG n=371 Tax=cellular organisms RepID=SFGH2_ECODH
L3_069_049G1_scaffold_76_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15471..17462)
DNA (1992bp) protein (664aa)
Outer membrane receptor for iron-regulated colicin I receptor n=19 Tax=Escherichia coli RepID=J7R6A6_ECOLX
Colicin I receptor {ECO:0000313|EMBL:EFJ89253.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
catecholate siderophore receptor CirA
L3_069_049G1_scaffold_76_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17755..19224)
DNA (1470bp) protein (490aa)
Lysine-specific permease n=666 Tax=Enterobacteriaceae RepID=LYSP_ECOLI
lysine transporter
Lysine-specific permease {ECO:0000313|EMBL:EOV78300.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_069_049G1_scaffold_76_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19429..20310)
DNA (882bp) protein (294aa)
Uncharacterized HTH-type transcriptional regulator YeiE n=1182 Tax=Enterobacteriaceae RepID=YEIE_ECO57
yeiE; putative DNA-binding transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EFK49364.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L3_069_049G1_scaffold_76_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20409..21458
DNA (1050bp) protein (350aa)
UPF0324 inner membrane protein YeiH n=1158 Tax=Enterobacteriaceae RepID=YEIH_ECO57
hypothetical protein
Putative membrane protein YeiH {ECO:0000313|EMBL:CDK45281.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L3_069_049G1_scaffold_76_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21532..22389
DNA (858bp) protein (286aa)
nfo; endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Probable endonuclease 4 n=397 Tax=Enterobacteriaceae RepID=END4_ECO24
L3_069_049G1_scaffold_76_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22393..23481
DNA (1089bp) protein (363aa)
Predicted kinase n=269 Tax=Enterobacteriaceae RepID=C8TU84_ECO26
yeiI; kinase
Pyrimidine kinase {ECO:0000313|EMBL:EOV78304.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_069_049G1_scaffold_76_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23537..24787)
DNA (1251bp) protein (417aa)
Nucleoside transporter, NupC family n=45 Tax=Escherichia coli RepID=A8A224_ECOHS
NupC family nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_069_049G1_scaffold_76_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24887..25828)
DNA (942bp) protein (314aa)
Pyrimidine-specific ribonucleoside hydrolase RihB {ECO:0000256|HAMAP-Rule:MF_01433}; EC=3.2.2.8 {ECO:0000256|HAMAP-Rule:MF_01433};; Cytidine/uridine-specific hydrolase {ECO:0000256|HAMAP-Rule:MF_01433}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
Pyrimidine-specific ribonucleoside hydrolase RihB n=102 Tax=Escherichia coli RepID=RIHB_ECO8A
rihB; ribonucleoside hydrolase 2
L3_069_049G1_scaffold_76_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25958..26656
DNA (699bp) protein (233aa)
Regulatory protein Nsr n=4 Tax=Escherichia coli RepID=B3H8W2_ECOLX
Regulatory protein nsr {ECO:0000313|EMBL:EGB89853.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
yeiL; DNA-binding transcriptional activator YeiL
L3_069_049G1_scaffold_76_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26727..27977)
DNA (1251bp) protein (417aa)
Nucleoside transporter n=243 Tax=Enterobacteriaceae RepID=E1PHC1_ECOAB
putative transport protein
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_069_049G1_scaffold_76_26
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28071..29009)
DNA (939bp) protein (313aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=300269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei (strain Ss046).;"
Pseudouridine-5'-phosphate glycosidase n=202 Tax=Enterobacteriaceae RepID=B7UFI1_ECO27
yeiN; indigoidine synthase A like protein
L3_069_049G1_scaffold_76_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28997..29938)
DNA (942bp) protein (314aa)
Kinase, PfkB family n=14 Tax=Enterobacteriaceae RepID=E1IJI4_ECOLX
pseudouridine kinase
Kinase, PfkB family {ECO:0000313|EMBL:EID67101.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_069_049G1_scaffold_76_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30395..32086)
DNA (1692bp) protein (564aa)
Pts system fructose-specific eiibc component n=7 Tax=Enterobacteriaceae RepID=B3H8V8_ECOLX
Pts system fructose-specific eiibc component {ECO:0000313|EMBL:AIF64746.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
fruA; PTS system fructose-specific EIIBC component
L3_069_049G1_scaffold_76_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32103..33041)
DNA (939bp) protein (313aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56)
1-phosphofructokinase n=1392 Tax=Enterobacteriaceae RepID=K1PF_ECO57
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_069_049G1_scaffold_76_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33041..34171)
DNA (1131bp) protein (377aa)
PTS system fructose-specific IIA component n=20 Tax=Escherichia coli RepID=B6I8M0_ECOSE
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein
PTS system fructose-specific IIA component {ECO:0000313|EMBL:BAG77961.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SE11).;"
Displaying items 1-30 of 90 in total

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