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L3_069_049G1_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_111_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(158..997)
DNA (840bp) protein (280aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Clostridium perfringens F262 RepID=H7CSI5_CLOPF
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EIA18360.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_111_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(954..2273)
DNA (1320bp) protein (440aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000313|EMBL:EDT28023.1}; EC=1.4.3.16 {ECO:0000313|EMBL:EDT28023.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L-aspartate oxidase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TU50_CLOP1
L3_069_049G1_scaffold_111_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2278..3183)
DNA (906bp) protein (302aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Quinolinate synthase A n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0V4_CLOPF
nadA; quinolinate synthetase
L3_069_049G1_scaffold_111_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3491..4354)
DNA (864bp) protein (288aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSI2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18357.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_111_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4767..4919)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGL1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81077.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_069_049G1_scaffold_111_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5044..5877)
DNA (834bp) protein (278aa)
Probable phosphoesterase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNE6_CLOPE
phosphoesterase
Probable phosphoesterase {ECO:0000313|EMBL:BAB80097.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_049G1_scaffold_111_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6345..7307
DNA (963bp) protein (321aa)
Histidine decarboxylase, pyruvoyl type {ECO:0000313|EMBL:EDT25120.1}; EC=4.1.1.22 {ECO:0000313|EMBL:EDT25120.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
histidine decarboxylase, pyruvoyl type (EC:4.1.1.22)
Histidine decarboxylase, pyruvoyl type n=3 Tax=Clostridium perfringens RepID=B1R496_CLOPF
L3_069_049G1_scaffold_111_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7353..8798
DNA (1446bp) protein (482aa)
Putative amino-acid transporter CPF_0377 n=8 Tax=Clostridium perfringens RepID=Y377_CLOP1
arginine/ornithine antiporter
Putative arginine/ornithine antiporter {ECO:0000313|EMBL:EDT25136.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_069_049G1_scaffold_111_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9228..10418)
DNA (1191bp) protein (397aa)
deoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Phosphopentomutase n=7 Tax=Clostridium perfringens RepID=DEOB_CLOP1
L3_069_049G1_scaffold_111_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10596..11381)
DNA (786bp) protein (262aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
udp; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=3 Tax=Clostridium perfringens RepID=B1BGK7_CLOPF
L3_069_049G1_scaffold_111_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11616..12347
DNA (732bp) protein (244aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNS3_CLOPF
transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT16608.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_069_049G1_scaffold_111_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12370..13188)
DNA (819bp) protein (273aa)
Oxidoreductase, short-chain dehydrogenase/reductase family n=5 Tax=Clostridium perfringens RepID=Q0TU60_CLOP1
short chain dehydrogenase/reductase oxidoreductase
Oxidoreductase, short-chain dehydrogenase/reductase family {ECO:0000313|EMBL:EDT27838.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_069_049G1_scaffold_111_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13593..14513
DNA (921bp) protein (307aa)
Xylanase/chitin deacetilase n=2 Tax=Clostridium perfringens RepID=H7CSH3_CLOPF
Xylanase/chitin deacetilase {ECO:0000313|EMBL:EIA18348.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
xylanase/chitin deacetilase
L3_069_049G1_scaffold_111_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14675..15073)
DNA (399bp) protein (133aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGK3_CLOPF
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:EDS81071.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_069_049G1_scaffold_111_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15395..16423)
DNA (1029bp) protein (343aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Glycosyl hydrolase, family 25 n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDN4_CLOPF
autolytic lysozyme
L3_069_049G1_scaffold_111_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16688..17086
DNA (399bp) protein (133aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CSF9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18334.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_111_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17170..18951)
DNA (1782bp) protein (594aa)
ABC transporter, permease/ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1RDN6_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT27890.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter permease/ATP-binding protein
L3_069_049G1_scaffold_111_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18944..20677)
DNA (1734bp) protein (578aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP06_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT28072.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter permease/ATP-binding protein
L3_069_049G1_scaffold_111_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21065..22858)
DNA (1794bp) protein (598aa)
67 kDa myosin-cross-reactive antigen family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW09_CLOPS
myosin-cross-reactive antigen
67 kDa myosin-cross-reactive antigen family protein {ECO:0000313|EMBL:ABG86099.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_069_049G1_scaffold_111_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23208..23786)
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CSF5_CLOPF
TetR family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80083.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_049G1_scaffold_111_21
unknown

Not on your lists

comp(24332..24454)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_069_049G1_scaffold_111_22
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24592..26520)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VG25_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42659.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
Protein of unknown function (DUF3732).
L3_069_049G1_scaffold_111_23
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26514..27011)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VMF2_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42658.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_069_049G1_scaffold_111_24
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27002..28156)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPR4_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42657.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L3_069_049G1_scaffold_111_25
unknown

Not on your lists

comp(28796..29230)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_069_049G1_scaffold_111_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29230..29892)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AB52_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEH96559.1}; TaxID=1443117 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 16868.;"
L3_069_049G1_scaffold_111_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30981..32348)
DNA (1368bp) protein (456aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ABG87034.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABG87034.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW23_CLOPS
RNA methyltransferase
L3_069_049G1_scaffold_111_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32650..34212)
DNA (1563bp) protein (521aa)
Transcriptional regulator, GntR family/aminotransferase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGJ4_CLOPF
Transcriptional regulator, GntR family/aminotransferase {ECO:0000313|EMBL:EDS81041.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
GntR family transcriptional regulator
L3_069_049G1_scaffold_111_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34479..34637
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CSE7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18469.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_111_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34843..36378)
DNA (1536bp) protein (512aa)
Cardiolipin synthetase {ECO:0000313|EMBL:EDT72687.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDT72687.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Cardiolipin synthetase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0E7_CLOPF
clsB; cardiolipin synthetase
Displaying items 1-30 of 70 in total

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