ggKbase home page

L3_069_049G1_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_113_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92..1072
DNA (981bp) protein (327aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CWB5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17068.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_113_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1110..1979)
DNA (870bp) protein (290aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Methionine aminopeptidase n=6 Tax=Clostridium perfringens RepID=H7CWB6_CLOPF
L3_069_049G1_scaffold_113_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2169..2270)
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CWB7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17070.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_113_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2327..2923)
DNA (597bp) protein (199aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CWB8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81485.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_069_049G1_scaffold_113_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3025..3948
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XKL0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81090.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_049G1_scaffold_113_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4088..4654)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXM6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13542.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_069_049G1_scaffold_113_7
unknown

Not on your lists

comp(4850..5047)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_069_049G1_scaffold_113_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5013..5228)
DNA (216bp) protein (72aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25473.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_069_049G1_scaffold_113_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5264..5746)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RKP8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25471.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_069_049G1_scaffold_113_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5963..6556)
DNA (594bp) protein (198aa)
Probable GTP-binding protein EngB n=8 Tax=Clostridium perfringens RepID=ENGB_CLOP1
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_069_049G1_scaffold_113_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6556..8886)
DNA (2331bp) protein (777aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Lon protease n=1 Tax=Clostridium perfringens F262 RepID=H7CWC4_CLOPF
lonA; ATP-dependent protease La
L3_069_049G1_scaffold_113_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9008..10720)
DNA (1713bp) protein (571aa)
Lon-like ATP-dependent protease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKK3_CLOPE
Lon-like ATP-dependent protease {ECO:0000313|EMBL:BAB81097.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
lonB; Lon-like ATP-dependent protease
L3_069_049G1_scaffold_113_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10831..12138)
DNA (1308bp) protein (436aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=9 Tax=Clostridium perfringens RepID=CLPX_CLOP1
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_069_049G1_scaffold_113_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12178..12762)
DNA (585bp) protein (195aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ATP-dependent Clp protease proteolytic subunit n=11 Tax=Clostridium perfringens RepID=CLPP_CLOP1
L3_069_049G1_scaffold_113_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12953..14239)
DNA (1287bp) protein (429aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Trigger factor n=9 Tax=Clostridium perfringens RepID=TIG_CLOP1
L3_069_049G1_scaffold_113_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14363..15154)
DNA (792bp) protein (264aa)
AP endonuclease, family 2 n=2 Tax=Clostridium perfringens RepID=B1RKP1_CLOPF
AP endonuclease, family 2 {ECO:0000313|EMBL:EDT25472.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
AP endonuclease
L3_069_049G1_scaffold_113_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15359..16945
DNA (1587bp) protein (529aa)
DEAD-box ATP dependent DNA helicase n=5 Tax=Clostridium perfringens RepID=H7CWD0_CLOPF
DEAD-box ATP dependent DNA helicase {ECO:0000313|EMBL:EIA17083.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
DEAD-box ATP dependent DNA helicase
L3_069_049G1_scaffold_113_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16984..17247)
DNA (264bp) protein (88aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWD1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14897.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_069_049G1_scaffold_113_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17441..18148
DNA (708bp) protein (236aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000255|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000255|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000255|HAMAP-Rule:MF_01627};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Purine nucleoside phosphorylase DeoD-type n=2 Tax=Clostridium perfringens RepID=DEOD_CLOP1
L3_069_049G1_scaffold_113_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18199..19482)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWD3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17086.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_069_049G1_scaffold_113_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19492..19836)
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CWD4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81106.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_069_049G1_scaffold_113_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20019..20927)
DNA (909bp) protein (303aa)
Exonuclease family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTR5_CLOPF
Exonuclease family protein {ECO:0000313|EMBL:EDT14863.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DNA polymerase III subunit epsilon
L3_069_049G1_scaffold_113_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21186..24107)
DNA (2922bp) protein (974aa)
Protein HypA n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=HYPA_CLOPE
Protein HypA; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
zinc metalloprotease
L3_069_049G1_scaffold_113_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24486..24755)
DNA (270bp) protein (90aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CWD7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25530.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_069_049G1_scaffold_113_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24925..26076
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTR8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14873.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_069_049G1_scaffold_113_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26326..27051)
DNA (726bp) protein (242aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium perfringens F262 RepID=H7CWD9_CLOPF
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIA17092.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
N-acetylmuramoyl-L-alanine amidase
L3_069_049G1_scaffold_113_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27209..27787
DNA (579bp) protein (193aa)
Flavoredoxin n=9 Tax=Clostridium perfringens RepID=Q0TQJ0_CLOP1
flavin reductase
Putative flavin reductase {ECO:0000313|EMBL:ABG85415.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L3_069_049G1_scaffold_113_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27915..29486)
DNA (1572bp) protein (524aa)
Voltage-gated chloride channel family protein n=2 Tax=Clostridium perfringens RepID=H7CWE1_CLOPF
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EIA17094.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
voltage-gated chloride channel family protein
L3_069_049G1_scaffold_113_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29749..31059
DNA (1311bp) protein (437aa)
Electron transport complex protein RnfC n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQI8_CLOP1
RnfABCDGE type electron transport complex subunit C
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_069_049G1_scaffold_113_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31073..32053
DNA (981bp) protein (327aa)
3'-5' exoribonuclease YhaM n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5V7_CLOPF
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
RnfABCDGE type electron transport complex subunit D
Displaying items 1-30 of 81 in total

View Taxonomy