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L3_069_049G1_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_114_1
Bifidobacterium minimum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..414
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Corynebacterium glucuronolyticum RepID=UPI00019C2360
Uncharacterized protein {ECO:0000313|EMBL:KFI72987.1}; TaxID=1693 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium minimum.;"
hypothetical protein
L3_069_049G1_scaffold_114_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3955..4359)
DNA (405bp) protein (135aa)
UPI0003D5DDF4 related cluster n=1 Tax=unknown RepID=UPI0003D5DDF4
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:ETI83704.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CRISPR-associated protein Cas2
L3_069_049G1_scaffold_114_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4359..5315)
DNA (957bp) protein (319aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D64F37 related cluster n=1 Tax=unknown RepID=UPI0003D64F37
CRISPR-associated protein Cas1
L3_069_049G1_scaffold_114_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5323..6030)
DNA (708bp) protein (236aa)
UPI0003D5AED8 related cluster n=1 Tax=unknown RepID=UPI0003D5AED8
Cse3 family CRISPR-associated protein {ECO:0000313|EMBL:ETI83706.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Cse3 family CRISPR-associated protein
L3_069_049G1_scaffold_114_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6027..6866)
DNA (840bp) protein (280aa)
UPI0003D64D32 related cluster n=1 Tax=unknown RepID=UPI0003D64D32
CRISPR-associated protein cas5, subtype {ECO:0000313|EMBL:ETI83707.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CRISPR-associated Cas5 family protein
L3_069_049G1_scaffold_114_6
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6891..8792)
DNA (1902bp) protein (634aa)
CRISPR-associated helicase cas3 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VX89_9ACTO
CRISPR-associated helicase cas3 {ECO:0000313|EMBL:EPD31446.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
CRISPR-associated protein, Cse1 family
L3_069_049G1_scaffold_114_7
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9019..11523
DNA (2505bp) protein (835aa)
Uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 51333 RepID=E6LXR0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFU80427.1}; TaxID=887326 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii ATCC 51333.;"
hypothetical protein
L3_069_049G1_scaffold_114_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11744..12496)
DNA (753bp) protein (251aa)
UPI0003D5A9D9 related cluster n=1 Tax=unknown RepID=UPI0003D5A9D9
Integral membrane protein {ECO:0000313|EMBL:ETI83709.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
integral membrane protein
L3_069_049G1_scaffold_114_9
Actinobaculum massiliense, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13076..13630)
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B3FD83
Uncharacterized protein {ECO:0000313|EMBL:EKU95587.1}; TaxID=883066 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum massiliense ACS-171-V-Col2.;"
hypothetical protein
L3_069_049G1_scaffold_114_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13897..15840
DNA (1944bp) protein (648aa)
peptide transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B5578D
Uncharacterized protein {ECO:0000313|EMBL:ETI83718.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_114_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16024..16575)
DNA (552bp) protein (184aa)
acetyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B3323D
Uncharacterized protein {ECO:0000313|EMBL:ETI83719.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_114_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16657..16953)
DNA (297bp) protein (99aa)
ferredoxin n=1 Tax=Varibaculum cambriense RepID=UPI0003B6022C
Uncharacterized protein {ECO:0000313|EMBL:ETI83720.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_114_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16955..18250)
DNA (1296bp) protein (432aa)
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
FAD-dependent oxidoreductase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4F9EF
Uncharacterized protein {ECO:0000313|EMBL:ETI83721.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_114_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18254..19123)
DNA (870bp) protein (290aa)
UPI0003D685AF related cluster n=1 Tax=unknown RepID=UPI0003D685AF
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:ETI83722.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fixB; electron transfer flavoprotein FixB
L3_069_049G1_scaffold_114_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19139..19900)
DNA (762bp) protein (254aa)
UPI0003D605DD related cluster n=1 Tax=unknown RepID=UPI0003D605DD
Electron transfer flavoprotein {ECO:0000313|EMBL:ETI83723.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fixA; electron transfer flavoprotein FixA
L3_069_049G1_scaffold_114_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20095..20724
DNA (630bp) protein (210aa)
UPI0003D5D1DF related cluster n=1 Tax=unknown RepID=UPI0003D5D1DF
Transcriptional regulatory protein, TetR family {ECO:0000313|EMBL:ETI83724.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
TetR family transcriptional regulator
L3_069_049G1_scaffold_114_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20783..21661)
DNA (879bp) protein (293aa)
UPI0003D5D9D9 related cluster n=1 Tax=unknown RepID=UPI0003D5D9D9
Uncharacterized protein {ECO:0000313|EMBL:ETI83725.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
maoC; MaoC acyl dehydratase
L3_069_049G1_scaffold_114_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21683..23263)
DNA (1581bp) protein (527aa)
UPI0003D69BD0 related cluster n=1 Tax=unknown RepID=UPI0003D69BD0
Uncharacterized protein {ECO:0000313|EMBL:ETI83726.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CoA ligase
L3_069_049G1_scaffold_114_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23253..24464)
DNA (1212bp) protein (404aa)
UPI0003D5D6D2 related cluster n=1 Tax=unknown RepID=UPI0003D5D6D2
Uncharacterized protein {ECO:0000313|EMBL:ETI83727.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
crotonobetainyl-CoA:carnitine CoA-transferase
L3_069_049G1_scaffold_114_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24474..25607)
DNA (1134bp) protein (378aa)
UPI0003D5BE71 related cluster n=1 Tax=unknown RepID=UPI0003D5BE71
Uncharacterized protein {ECO:0000313|EMBL:ETI83728.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
crotonobetainyl-CoA dehydrogenase
L3_069_049G1_scaffold_114_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25678..26643)
DNA (966bp) protein (322aa)
UPI0003D59ED0 related cluster n=1 Tax=unknown RepID=UPI0003D59ED0
Uncharacterized protein {ECO:0000313|EMBL:ETI83729.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
acetyl esterase
L3_069_049G1_scaffold_114_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26653..27996)
DNA (1344bp) protein (448aa)
UPI0003D61B31 related cluster n=1 Tax=unknown RepID=UPI0003D61B31
Uncharacterized protein {ECO:0000313|EMBL:ETI83730.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
MFS transporter
L3_069_049G1_scaffold_114_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28686..33482
DNA (4797bp) protein (1599aa)
ATP-dependent helicase n=1 Tax=Varibaculum cambriense RepID=UPI0003B677CC
Uncharacterized protein {ECO:0000313|EMBL:ETI83731.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ATP-dependent helicase
L3_069_049G1_scaffold_114_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33493..34884)
DNA (1392bp) protein (464aa)
Serine/threonine protein kinase PkaA (EC:2.7.11.1)
serine/threonine-protein kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4FBEE
Serine/threonine-protein kinase PkaA {ECO:0000313|EMBL:ETI83732.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_049G1_scaffold_114_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34971..35486)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B77957
Uncharacterized protein {ECO:0000313|EMBL:ETI83733.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_049G1_scaffold_114_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35536..36066)
DNA (531bp) protein (177aa)
phosphoribosyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4EA7A
Uncharacterized protein {ECO:0000313|EMBL:ETI83734.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoribosyltransferase
L3_069_049G1_scaffold_114_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36242..37681
DNA (1440bp) protein (480aa)
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B65F70
Uncharacterized protein {ECO:0000313|EMBL:ETI83735.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
inosine 5-monophosphate dehydrogenase
L3_069_049G1_scaffold_114_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37738..38217
DNA (480bp) protein (160aa)
protein tyrosine/serine phosphatase n=1 Tax=Varibaculum cambriense RepID=UPI0003B3B96D
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:ETI83736.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
protein tyrosine phosphatase
L3_069_049G1_scaffold_114_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38340..39827
DNA (1488bp) protein (496aa)
alanine glycine permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B564A9
Uncharacterized protein {ECO:0000313|EMBL:ETI83737.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
D-serine/D-alanine/glycine transporter
L3_069_049G1_scaffold_114_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40067..41797)
DNA (1731bp) protein (577aa)
isopentenyl-diphosphate delta-isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B64810
Uncharacterized protein {ECO:0000313|EMBL:ETI83738.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
isopentenyl-diphosphate delta-isomerase
Displaying items 1-30 of 75 in total

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