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L3_069_049G1_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_121_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110..919)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99132.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
RpiR family transcriptional regulator
L3_069_049G1_scaffold_121_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(993..2399)
DNA (1407bp) protein (469aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Beta-galactosidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHQ1_9CLOT
beta-galactosidase
L3_069_049G1_scaffold_121_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2446..2679)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99134.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_069_049G1_scaffold_121_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3015..3245)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99134.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_069_049G1_scaffold_121_5
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3513..3779)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HEK9_STRA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXU85471.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
L3_069_049G1_scaffold_121_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3939..4571)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99145.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_069_049G1_scaffold_121_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4766..6550)
DNA (1785bp) protein (595aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H503_9CLOT
L3_069_049G1_scaffold_121_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6561..7850)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H462_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99147.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
permease
L3_069_049G1_scaffold_121_9
unknown

Not on your lists

comp(8059..9162)
DNA (1104bp) protein (368aa)

This feature has no annotations

L3_069_049G1_scaffold_121_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9464..12271)
DNA (2808bp) protein (936aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82959.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
endo-beta-N-acetylglucosaminidase
L3_069_049G1_scaffold_121_11
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12622..13296)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030137D0
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMS69538.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
CAAX amino terminal protease family protein
L3_069_049G1_scaffold_121_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13464..14240)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H504_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99152.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
SAM-dependent methyltransferase
L3_069_049G1_scaffold_121_13
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14620..15186)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bacillus sp. 1NLA3E RepID=N0ANF3_9BACI
Uncharacterized protein {ECO:0000313|EMBL:CEE00575.1}; TaxID=35841 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermoamylovorans.;"
hypothetical protein
L3_069_049G1_scaffold_121_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15429..16784)
DNA (1356bp) protein (452aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1E9_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EOR22820.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_069_049G1_scaffold_121_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16999..17406)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99154.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_069_049G1_scaffold_121_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17436..18107)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR22822.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_069_049G1_scaffold_121_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18588..18797)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0L5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR22823.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
putative membrane protein
L3_069_049G1_scaffold_121_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18885..19556)
DNA (672bp) protein (224aa)
ComEA protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H505_9CLOT
ComEA protein {ECO:0000313|EMBL:EEH99157.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
competence protein ComEA helix-hairpin-helix repeat protein
L3_069_049G1_scaffold_121_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19709..20995
DNA (1287bp) protein (429aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1F5_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EOR22825.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
D-alanyl-D-alanine carboxypeptidase family protein
L3_069_049G1_scaffold_121_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21127..22029)
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
RluA family pseudouridine synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6K0_9CLOT
RluA family pseudouridine synthase
L3_069_049G1_scaffold_121_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22301..23650)
DNA (1350bp) protein (450aa)
Membrane-bound protein LytR n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0J3_9CLOT
Membrane-bound protein LytR {ECO:0000313|EMBL:EOR22827.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
lytR; transcriptional regulator LytR
L3_069_049G1_scaffold_121_22
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23671..24237)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR22828.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
metal dependent phosphohydrolase
L3_069_049G1_scaffold_121_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24262..24879)
DNA (618bp) protein (206aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0F7_9CLOT
L3_069_049G1_scaffold_121_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24886..25182)
DNA (297bp) protein (99aa)
Putative RNA-binding protein, YhbY family n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1G0_9CLOT
Putative RNA-binding protein, YhbY family {ECO:0000313|EMBL:EOR22830.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
protein of unknown function UPF0044
L3_069_049G1_scaffold_121_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25201..26490)
DNA (1290bp) protein (430aa)
GTPase Obg n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6L8_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
cgtA; Obg family GTPase CgtA
L3_069_049G1_scaffold_121_26
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26789..27088)
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=R9C0K7_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rpmA; 50S ribosomal protein L27
L3_069_049G1_scaffold_121_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27090..27464)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99165.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_069_049G1_scaffold_121_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27470..27781)
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=2 Tax=Clostridium RepID=R9C0H2_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rplU; 50S ribosomal protein L21
L3_069_049G1_scaffold_121_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27913..28086)
DNA (174bp) protein (58aa)
Ribonuclease n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C1H3_9CLOT
Ribonuclease {ECO:0000313|EMBL:EOR22835.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ribonuclease, Rne/Rng family domain protein
L3_069_049G1_scaffold_121_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28124..29332)
DNA (1209bp) protein (403aa)
rng; ribonuclease G (EC:3.1.26.-)
Rne/Rng family ribonuclease n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ4_9CLOT
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EEH99167.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Displaying items 1-30 of 103 in total

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