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L3_069_049G1_scaffold_129

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_129_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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41..1933
DNA (1893bp) protein (631aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase (EC:2.3.1.12)
Dihydrolipoyllysine-residue acetyltransferase n=115 Tax=Enterobacteriaceae RepID=A7ZHK4_ECO24
L3_069_049G1_scaffold_129_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2258..3682
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Escherichia fergusonii ECD227 RepID=F0JQ13_ESCFE
lpd; lipoamide dehydrogenase, E3 component is part of three enzyme complexes
L3_069_049G1_scaffold_129_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3753..5510)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=I0VZ19_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EID69385.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
hypothetical protein
L3_069_049G1_scaffold_129_4
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5865..8462
DNA (2598bp) protein (866aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=300269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei (strain Ss046).;"
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3)
Aconitate hydratase 2 n=222 Tax=Enterobacteriaceae RepID=ACON2_ECOLI
L3_069_049G1_scaffold_129_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8637..8999
DNA (363bp) protein (121aa)
UPF0231 protein YacL n=1154 Tax=Enterobacteriaceae RepID=YACL_ECO24
hypothetical protein
UPF0231 protein YacL {ECO:0000256|HAMAP-Rule:MF_01053}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L3_069_049G1_scaffold_129_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9037..9831)
DNA (795bp) protein (265aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
S-adenosylmethionine decarboxylase proenzyme n=993 Tax=Enterobacteriaceae RepID=SPED_ECO24
speD; S-adenosylmethionine decarboxylase
L3_069_049G1_scaffold_129_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9847..10713)
DNA (867bp) protein (289aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=447 Tax=Enterobacteriaceae RepID=SPEE_ECO24
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_069_049G1_scaffold_129_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10819..11166)
DNA (348bp) protein (116aa)
YacC protein n=14 Tax=Escherichia coli RepID=D6I515_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE32108.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_069_049G1_scaffold_129_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11332..12882
DNA (1551bp) protein (517aa)
Blue copper oxidase CueO n=138 Tax=Bacteria RepID=CUEO_ECOLI
Blue copper oxidase CueO {ECO:0000313|EMBL:EOW19577.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
multicopper oxidase
L3_069_049G1_scaffold_129_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13084..15474)
DNA (2391bp) protein (797aa)
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family {ECO:0000313|EMBL:ACT30494.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ACT30494.1};; Flags: Precursor;; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
Glucose dehydrogenase n=296 Tax=Escherichia coli RepID=C3TQ62_ECOLX
glucose dehydrogenase
L3_069_049G1_scaffold_129_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15680..16216
DNA (537bp) protein (179aa)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Shigella sp. D9 RepID=F4NL53_9ENTR
hypoxanthine phosphoribosyltransferase
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ADD54783.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L3_069_049G1_scaffold_129_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16257..16919)
DNA (663bp) protein (221aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
Carbonic anhydrase 2 n=884 Tax=Enterobacteriaceae RepID=CAN_ECOLI
can; carbonic anhydrase
L3_069_049G1_scaffold_129_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17028..17954
DNA (927bp) protein (309aa)
Uncharacterized ABC transporter ATP-binding protein YadG n=718 Tax=Enterobacteriaceae RepID=YADG_ECOLI
yadG; transporter subunit: ATP-binding component of ABC superfamily
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EII45379.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
L3_069_049G1_scaffold_129_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17951..18721
DNA (771bp) protein (257aa)
Inner membrane transport permease YadH n=1360 Tax=Enterobacteriaceae RepID=YADH_ECO57
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_069_049G1_scaffold_129_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18826..19266
DNA (441bp) protein (147aa)
PTS system, IIA component n=240 Tax=Enterobacteriaceae RepID=A7ZHL8_ECO24
PTS system transporter subunit IIA
PTS system fructose IIA component family protein {ECO:0000313|EMBL:KEO04302.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L3_069_049G1_scaffold_129_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19330..20559
DNA (1230bp) protein (410aa)
Uncharacterized protein n=208 Tax=Escherichia coli RepID=B6HZA5_ECOSE
yadE; putative polysaccharide deacetylase lipoprotein
Polysaccharide deacetylase {ECO:0000313|EMBL:ESD23307.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L3_069_049G1_scaffold_129_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20563..20943)
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Aspartate 1-decarboxylase n=1325 Tax=Enterobacteriaceae RepID=PAND_ECO24
panD; aspartate 1-decarboxylase
L3_069_049G1_scaffold_129_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21217..22119
DNA (903bp) protein (301aa)
Transposase YhgA family protein n=185 Tax=Escherichia coli RepID=E8YCM2_ECOKO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX37275.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L3_069_049G1_scaffold_129_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22193..23044)
DNA (852bp) protein (284aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Pantothenate synthetase n=430 Tax=Enterobacteriaceae RepID=PANC_ECO24
L3_069_049G1_scaffold_129_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23056..23850)
DNA (795bp) protein (265aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=257 Tax=Escherichia coli RepID=PANB_ECO24
L3_069_049G1_scaffold_129_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23963..25237)
DNA (1275bp) protein (425aa)
Predicted fimbrial-like adhesin protein n=341 Tax=Enterobacteriaceae RepID=C6UM96_ECOBR
yadC; putative fimbrial-like adhesin protein
Adhesin {ECO:0000313|EMBL:AIZ85718.1}; Fimbrial adhesin YadC {ECO:0000313|EMBL:AJE54434.1}; Putative fimbrial protein {ECO:0000313|EMBL:CCJ42603.1}; Putative fimbrial-like adhesin protein {ECO:0000313|EMBL:CCQ27016.2}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_069_049G1_scaffold_129_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25290..25886)
DNA (597bp) protein (199aa)
Predicted fimbrial-like adhesin protein n=318 Tax=Enterobacteriaceae RepID=J7QCA6_ECOLX
yadK; putative fimbrial protein StaF
Uncharacterized protein {ECO:0000313|EMBL:EMU66241.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
L3_069_049G1_scaffold_129_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25913..26515)
DNA (603bp) protein (201aa)
Fimbrial protein n=341 Tax=Enterobacteriaceae RepID=C6EAS0_ECOBD
fimbrial protein StaE
YadL protein {ECO:0000313|EMBL:EFE60691.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_069_049G1_scaffold_129_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26530..27099)
DNA (570bp) protein (190aa)
Predicted fimbrial-like adhesin protein n=420 Tax=Enterobacteriaceae RepID=C6EAE6_ECOBD
yadM; fimbrial-like adhesin protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ86125.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_069_049G1_scaffold_129_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27116..29716)
DNA (2601bp) protein (867aa)
Outer membrane usher protein htrE n=44 Tax=Enterobacteriaceae RepID=E7JD43_ECOLX
Fimbrial Usher family protein {ECO:0000313|EMBL:EHW80241.1}; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC10B.;"
htrE; outer membrane usher protein
L3_069_049G1_scaffold_129_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29751..30491)
DNA (741bp) protein (247aa)
Gram-negative pili assembly chaperone n=16 Tax=Escherichia coli RepID=A7ZHN0_ECO24
ecpD; putative chaperone protein EcpD
Putative chaperone protein EcpD {ECO:0000313|EMBL:EID69361.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_069_049G1_scaffold_129_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30596..31180)
DNA (585bp) protein (195aa)
Uncharacterized fimbrial-like protein YadN n=502 Tax=Enterobacteriaceae RepID=YADN_ECOLI
yadN; fimbrial-like protein
Fimbrial family protein {ECO:0000313|EMBL:EGW99010.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_069_049G1_scaffold_129_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31550..32029)
DNA (480bp) protein (160aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABV20345.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ABV20345.1};; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=349 Tax=Enterobacteriaceae RepID=J7QM26_ECOLX
L3_069_049G1_scaffold_129_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32026..33390)
DNA (1365bp) protein (455aa)
pcnB; poly(A) polymerase (EC:2.7.7.19)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
Poly(A) polymerase I n=216 Tax=Escherichia coli RepID=J7QCB3_ECOLX
L3_069_049G1_scaffold_129_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33483..34409)
DNA (927bp) protein (309aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
Glutamyl-Q tRNA(Asp) synthetase n=43 Tax=Escherichia coli RepID=A7ZHN5_ECO24
gluQ; glutamyl-Q tRNA(Asp) synthetase
Displaying items 1-30 of 69 in total

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