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L3_069_049G1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_255_1
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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2..370
DNA (369bp) protein (123aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZKM3_9FIRM
L3_069_049G1_scaffold_255_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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388..2763
DNA (2376bp) protein (792aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
Phosphorylase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UHW4_RUMA7
glycogen/starch/alpha-glucan phosphorylase
L3_069_049G1_scaffold_255_3
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2824..4119
DNA (1296bp) protein (432aa)
ABC transporter, solute-binding protein n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GX80_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGC81525.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS-065-V-Col13.;"
family 1 extracellular solute-binding protein
L3_069_049G1_scaffold_255_4
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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4183..4668
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2L707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ85214.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral taxon 113 str. W5053.;"
L3_069_049G1_scaffold_255_5
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4684..6771
DNA (2088bp) protein (696aa)
Sugar ABC transporter permease n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I1Y7_9CLOT
Sugar ABC transporter permease {ECO:0000313|EMBL:ETA79888.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
sugar ABC transporter permease
L3_069_049G1_scaffold_255_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6774..7670
DNA (897bp) protein (299aa)
sugar ABC transporter permease n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFF43
Sugar ABC transporter permease {ECO:0000313|EMBL:ETA79889.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
binding-protein-dependent transport system innermembrane protein
L3_069_049G1_scaffold_255_7
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7683..8765
DNA (1083bp) protein (361aa)
ABC transporter ATP-binding protein n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFF42
Uncharacterized protein {ECO:0000313|EMBL:EHR34065.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
ABC transporter ATP-binding protein
L3_069_049G1_scaffold_255_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8797..9465)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPT5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62747.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_069_049G1_scaffold_255_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10045..11250
DNA (1206bp) protein (402aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine-tRNA ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD37_9CLOT
L3_069_049G1_scaffold_255_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11276..11785)
DNA (510bp) protein (170aa)
Copper/zinc superoxide dismutase n=2 Tax=Clostridiales RepID=B0A9Z5_9FIRM
Superoxide dismutase [Cu-Zn] {ECO:0000313|EMBL:CDA11477.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
sodC; Cu/Zn family superoxide dismutase
L3_069_049G1_scaffold_255_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11881..12132
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98612.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_069_049G1_scaffold_255_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12349..12681
DNA (333bp) protein (111aa)
UPI0003D5B500 related cluster n=1 Tax=unknown RepID=UPI0003D5B500
Uncharacterized protein {ECO:0000313|EMBL:ETI93425.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
thioredoxin domain protein
L3_069_049G1_scaffold_255_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13024..14583
DNA (1560bp) protein (520aa)
Two component transcriptional regulator, arac family protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q0M7_9CLOT
Two component transcriptional regulator, arac family protein {ECO:0000313|EMBL:ERK32325.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
AraC; AraC family transcriptional regulator
L3_069_049G1_scaffold_255_14
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14596..15681
DNA (1086bp) protein (362aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMX8_CLOPH
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABX42989.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_069_049G1_scaffold_255_15
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15819..17012
DNA (1194bp) protein (398aa)
ABC transporter, ATP binding-protein n=3 Tax=Clostridium acetobutylicum RepID=F0KDS6_CLOAE
bceA; ABC transporter ATP-binding protein
ABC transporter, ATP binding-protein {ECO:0000313|EMBL:AAK78147.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L3_069_049G1_scaffold_255_16
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17022..18308
DNA (1287bp) protein (429aa)
ABC transporter permease n=1 Tax=Clostridium intestinale URNW RepID=U2Q3R5_9CLOT
ABC transporter permease {ECO:0000313|EMBL:ERK30724.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
putative membrane protein
L3_069_049G1_scaffold_255_17
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18347..19438)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI000375DB93
putative amidase domain-containing protein
Putative amidase domain-containing protein {ECO:0000313|EMBL:AGF56957.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_069_049G1_scaffold_255_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19435..20358)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V1K8_CLOBA
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:AIY82069.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
L3_069_049G1_scaffold_255_19
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20545..21942
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EKF3_CLOPA
ErfK/YbiS/YcfS/YnhG family protein
ErfK family protein {ECO:0000313|EMBL:AJH01149.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_069_049G1_scaffold_255_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22083..22610
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR41_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43070.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_069_049G1_scaffold_255_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22687..23919
DNA (1233bp) protein (411aa)
Peptidase, U32 family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK24_9CLOT
Peptidase, U32 family {ECO:0000313|EMBL:EKY28339.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
peptidase U32
L3_069_049G1_scaffold_255_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24115..24669
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28338.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_069_049G1_scaffold_255_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24669..25136
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28337.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L3_069_049G1_scaffold_255_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25124..25741
DNA (618bp) protein (206aa)
Putative accessory gene regulator protein B n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWF6_CLOBO
accessory gene regulator B superfamily
Putative accessory gene regulator protein B {ECO:0000313|EMBL:EES49075.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_069_049G1_scaffold_255_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25775..25900
DNA (126bp) protein (42aa)
Putative lipoprotein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWF5_CLOBO
Putative lipoprotein {ECO:0000313|EMBL:EES48056.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative autoinducer prepeptide
L3_069_049G1_scaffold_255_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25960..27642
DNA (1683bp) protein (561aa)
Ggdef/hd domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UWF4_CLOBO
Ggdef/hd domain protein {ECO:0000313|EMBL:EES48569.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
ggdef/hd domain protein
L3_069_049G1_scaffold_255_27
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27800..31246
DNA (3447bp) protein (1149aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594, ECO:0000313|EMBL:CDM68204.1}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594, ECO:0000313|EMBL:CDM68204.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
pyc; Pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase Pyc n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRI0_CLOSA
L3_069_049G1_scaffold_255_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31345..31761
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UXE8_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07747.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_069_049G1_scaffold_255_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31807..32817)
DNA (1011bp) protein (337aa)
Cysteine synthase {ECO:0000313|EMBL:EES50863.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EES50863.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
cysteine synthase (EC:2.5.1.47)
cysteine synthase n=1 Tax=Clostridium botulinum RepID=UPI0003810D00
L3_069_049G1_scaffold_255_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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33147..34310
DNA (1164bp) protein (388aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI00031B6FCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82393.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 37 in total

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