ggKbase home page

L3_069_049G1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_272_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

418..1734
DNA (1317bp) protein (439aa)
Putative Phosphodiesterase/nucleotide pyrophosphatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESU2_9CLOT
Putative Phosphodiesterase/nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:CDG02290.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L3_069_049G1_scaffold_272_2
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1915..2136
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1S9_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79072.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L3_069_049G1_scaffold_272_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2303..2644
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DCB1DC
Uncharacterized protein {ECO:0000313|EMBL:KIE44505.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L3_069_049G1_scaffold_272_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2792..3247
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:CEK34503.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
L3_069_049G1_scaffold_272_5
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3360..3551
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) RepID=A5N344_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDK35540.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L3_069_049G1_scaffold_272_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3759..5006
DNA (1248bp) protein (416aa)
Membrane protein, putative n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQD1_9CLOT
MFS transporter {ECO:0000313|EMBL:KJU72957.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
major facilitator transporter
L3_069_049G1_scaffold_272_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5310..6287)
DNA (978bp) protein (326aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80580.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
L3_069_049G1_scaffold_272_8
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6271..7101)
DNA (831bp) protein (277aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase N-terminal subunit n=1 Tax=Roseburia sp. CAG:182 RepID=R7QTS9_9FIRM
Transketolase N-terminal subunit {ECO:0000313|EMBL:CDF41504.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L3_069_049G1_scaffold_272_9
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7109..8329)
DNA (1221bp) protein (407aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
6-phosphofructokinase (EC:2.7.1.11)
Phosphofructokinase n=1 Tax=Roseburia sp. CAG:471 RepID=R7E915_9FIRM
L3_069_049G1_scaffold_272_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8362..9015)
DNA (654bp) protein (218aa)
2-keto-3-deoxy-6-phosphogluconate aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4G9_9CLOT
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EEH98631.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_069_049G1_scaffold_272_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9034..10092)
DNA (1059bp) protein (353aa)
PTS system, Fru family, IIC component domain protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q252_9CLOT
PTS system, Fru family, IIC component domain protein {ECO:0000313|EMBL:ERK30129.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
PTS system, fructose subfamily, IIC component
L3_069_049G1_scaffold_272_12
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10110..10418)
DNA (309bp) protein (103aa)
PTS system fructose-like EIIB component 2 (EC:2.7.1.69)
PTS system fructose-like EIIB component 2 n=1 Tax=Clostridium intestinale URNW RepID=U2NQB6_9CLOT
PTS system fructose-like EIIB component 2 {ECO:0000313|EMBL:ERK31373.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L3_069_049G1_scaffold_272_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10431..10889)
DNA (459bp) protein (153aa)
fruA_4; PTS system fructose subfamily transporter subunit IIA (EC:2.7.1.69)
PTS system fructose subfamily transporter subunit IIA n=1 Tax=Clostridium intestinale URNW RepID=U2NP86_9CLOT
PTS system fructose subfamily transporter subunit IIA {ECO:0000313|EMBL:ERK30651.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L3_069_049G1_scaffold_272_14
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10892..12913)
DNA (2022bp) protein (674aa)
PRD domain/PTS system IIA domain transcriptional antiterminator, BglG protein n=1 Tax=Clostridium intestinale URNW RepID=U2PXC8_9CLOT
PRD domain/PTS system IIA domain transcriptional antiterminator, BglG protein {ECO:0000313|EMBL:ERK31100.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Transcriptional antiterminator
L3_069_049G1_scaffold_272_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(13411..14646)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RF26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43934.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_069_049G1_scaffold_272_16
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(14647..15531)
DNA (885bp) protein (295aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7S8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC43935.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transporter protein
L3_069_049G1_scaffold_272_17
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15550..16332)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI66738.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_069_049G1_scaffold_272_18
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16310..16858)
DNA (549bp) protein (183aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEF8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EGN36520.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L3_069_049G1_scaffold_272_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17041..17655)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028803FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41707.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_069_049G1_scaffold_272_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17784..17945)
DNA (162bp) protein (54aa)
acetyltransferase n=1 Tax=Clostridium botulinum RepID=UPI00037FD76A
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EES50996.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
N-acetyltransferase GCN5
L3_069_049G1_scaffold_272_21
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18122..18943)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ00361.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
L3_069_049G1_scaffold_272_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19265..19843)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96659.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
TetR family transcriptional regulator
L3_069_049G1_scaffold_272_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20082..20507)
DNA (426bp) protein (142aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
Methylglyoxal synthase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFN2_9CLOT
methylglyoxal synthase
L3_069_049G1_scaffold_272_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20882..29563)
DNA (8682bp) protein (2894aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6G4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96657.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cellobiose phosphorylase
L3_069_049G1_scaffold_272_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29932..30444)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJK0_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ85595.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L3_069_049G1_scaffold_272_26
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31489..32364)
DNA (876bp) protein (292aa)
RpiR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFT5_9CLOT
RpiR family transcriptional regulator {ECO:0000313|EMBL:EOR28162.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
SIS domain protein
L3_069_049G1_scaffold_272_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32388..33461)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96655.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_069_049G1_scaffold_272_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34092..35453)
DNA (1362bp) protein (454aa)
PTS system, glucose-like IIB component domain protein (EC:2.7.1.69)
PTS system, glucose-like IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP8_9CLOT
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EOR28164.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
L3_069_049G1_scaffold_272_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35478..36383)
DNA (906bp) protein (302aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
murQ; N-acetylmuramic acid 6-phosphate etherase (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6G2_9CLOT
L3_069_049G1_scaffold_272_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37097..38392)
DNA (1296bp) protein (432aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative aminopeptidase 2 (EC:3.4.11.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1S6_9CLOT
Displaying items 1-30 of 33 in total

View Taxonomy