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L3_069_049G1_scaffold_466

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_466_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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215..907
DNA (693bp) protein (231aa)
Transcriptional regulator, GntR family n=342 Tax=Enterobacteriaceae RepID=A7ZTW6_ECO24
yieP; transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:END87684.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_069_049G1_scaffold_466_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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930..2357
DNA (1428bp) protein (476aa)
Predicted multidrug or homocysteine efflux system protein HsrA n=74 Tax=Enterobacteriaceae RepID=C8UJE5_ECO1A
transporter
Putative transport protein hsrA {ECO:0000313|EMBL:EMX46128.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
L3_069_049G1_scaffold_466_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2323..3315)
DNA (993bp) protein (331aa)
Ribose operon repressor n=544 Tax=Enterobacteriaceae RepID=RBSR_ECO57
rbsR; transcriptional repressor RbsR
RbsR protein {ECO:0000313|EMBL:CEP59128.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
L3_069_049G1_scaffold_466_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3319..4248)
DNA (930bp) protein (310aa)
ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:EFK52947.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EFK52947.1};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Ribokinase n=95 Tax=Enterobacteriaceae RepID=B5YY10_ECO5E
L3_069_049G1_scaffold_466_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4374..5264)
DNA (891bp) protein (297aa)
D-ribose periplasmic binding protein n=1147 Tax=Enterobacteriaceae RepID=C3SL12_ECOLX
D-ribose transporter subunit RbsB
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:ELI20803.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_069_049G1_scaffold_466_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5289..6254)
DNA (966bp) protein (322aa)
Ribose transport system permease protein RbsC n=1343 Tax=Enterobacteriaceae RepID=RBSC_ECO57
rbsC; high-affinity ribose transport system permease protein RbsC
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KDY60301.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L3_069_049G1_scaffold_466_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6259..7764)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
ATP-binding component of D-ribose high-affinity transport system n=47 Tax=Escherichia coli RepID=J7QIS5_ECOLX
D-ribose ABC transporter ATP-binding protein
L3_069_049G1_scaffold_466_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7772..8191)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
D-ribose pyranase n=59 Tax=Enterobacteriaceae RepID=J7QXP1_ECOLX
D-ribose pyranase
L3_069_049G1_scaffold_466_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8358..10226)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=924 Tax=Enterobacteriaceae RepID=KUP_ECO24
potassium uptake protein
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_069_049G1_scaffold_466_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10449..11945
DNA (1497bp) protein (499aa)
ATPase RavA {ECO:0000256|HAMAP-Rule:MF_01625}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01625};; Regulatory ATPase variant A {ECO:0000256|HAMAP-Rule:MF_01625}; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C1.;"
ATPase RavA n=256 Tax=Enterobacteriaceae RepID=RAVA_ECOBW
yieN; fused putative transcriptional regulator: sigma54 activator protein/hypothetical protein
L3_069_049G1_scaffold_466_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11939..13390
DNA (1452bp) protein (484aa)
Protein ViaA n=554 Tax=Enterobacteriaceae RepID=VIAA_ECO57
hypothetical protein
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
L3_069_049G1_scaffold_466_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13395..14387)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
Aspartate--ammonia ligase n=109 Tax=Escherichia coli RepID=D6I310_ECOLX
asnA; aspartate--ammonia ligase AsnA
L3_069_049G1_scaffold_466_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14539..14997
DNA (459bp) protein (153aa)
Regulatory protein AsnC n=1413 Tax=Enterobacteriaceae RepID=ASNC_ECO57
hypothetical protein
Regulatory protein AsnC {ECO:0000313|EMBL:KEJ54808.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L3_069_049G1_scaffold_466_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15087..15530
DNA (444bp) protein (148aa)
MioC protein n=302 Tax=Enterobacteriaceae RepID=A7ZTV3_ECO24
mioC; FMN-binding protein MioC
Protein mioC {ECO:0000313|EMBL:EGW85912.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_069_049G1_scaffold_466_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15909..17798
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=815 Tax=Enterobacteriaceae RepID=MNMG_ECO24
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1444127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C1.;"
glucose inhibited division protein A
L3_069_049G1_scaffold_466_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17862..18485
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
Ribosomal RNA small subunit methyltransferase G n=1222 Tax=Enterobacteriaceae RepID=RSMG_ECO27
gidB; methyltransferase GidB
L3_069_049G1_scaffold_466_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19102..19482
DNA (381bp) protein (127aa)
ATP F0F1 synthase subunit I {ECO:0000313|EMBL:EZE09775.1}; EC=3.6.3.14 {ECO:0000313|EMBL:EZE09775.1};; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
UPI0003D5A811 related cluster n=1 Tax=unknown RepID=UPI0003D5A811
atpI; membrane-bound ATP synthase
L3_069_049G1_scaffold_466_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19491..20306
DNA (816bp) protein (272aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=835 Tax=Enterobacteriaceae RepID=ATP6_ECO24
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L3_069_049G1_scaffold_466_19
unknown

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20353..20415
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 19 items

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