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L3_069_049G1_scaffold_499

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_499_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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595..1008
DNA (414bp) protein (138aa)
Uncharacterized protein n=122 Tax=Clostridium difficile RepID=G6BS98_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDT02122.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L3_069_049G1_scaffold_499_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1018..1113
DNA (96bp) protein (32aa)
Uncharacterised protein {ECO:0000313|EMBL:CKH92086.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_049G1_scaffold_499_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1317..4748
DNA (3432bp) protein (1144aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Pyruvate carboxylase n=141 Tax=Clostridium difficile RepID=C9XID3_CLODC
pyc; pyruvate carboxylase
L3_069_049G1_scaffold_499_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4781..4930
DNA (150bp) protein (50aa)
Uncharacterized protein n=131 Tax=Clostridium difficile RepID=T3IMQ2_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EQE71058.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_049G1_scaffold_499_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4990..6918
DNA (1929bp) protein (643aa)
Elongation factor G (EF-G) n=181 Tax=Clostridium difficile RepID=Q18CA6_CLOD6
putative translation elongation factor
Small GTP-binding domain protein {ECO:0000313|EMBL:EQE71059.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_049G1_scaffold_499_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6994..7116
DNA (123bp) protein (41aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=G6BS94_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG79032.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_049G1_scaffold_499_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7371..7835
DNA (465bp) protein (155aa)
Transcriptional regulator n=211 Tax=Clostridium difficile RepID=C9XID5_CLODC
transcriptional regulator CtsR
Firmicute transcriptional repressor of class III stress {ECO:0000313|EMBL:EHJ32585.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_069_049G1_scaffold_499_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7842..8336
DNA (495bp) protein (165aa)
Activator of protein kinase McsB n=212 Tax=Clostridium difficile RepID=Q18CA7_CLOD6
mcsA; activator of protein kinase McsB
Uncharacterized protein {ECO:0000313|EMBL:EHJ34511.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_069_049G1_scaffold_499_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8352..9377
DNA (1026bp) protein (342aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Putative ATP:guanido phosphotransferase QEE_0026 n=1 Tax=Clostridium difficile CD113 RepID=T4YM09_CLODI
ATP:guanido phosphotransferase
L3_069_049G1_scaffold_499_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9364..11811
DNA (2448bp) protein (816aa)
Negative regulator of genetic competence ClpC/MecB n=167 Tax=Clostridium difficile RepID=T3IQT9_CLODC
clpC; class III stress response-related ATPase
Class III stress response-related ATPase, AAA+ superfamily {ECO:0000313|EMBL:CCL24565.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_049G1_scaffold_499_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11991..13364
DNA (1374bp) protein (458aa)
radA; DNA repair protein (EC:2.1.1.63)
DNA repair protein {ECO:0000313|EMBL:CAJ66841.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CAJ66841.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
DNA repair protein radA n=160 Tax=Clostridium difficile RepID=T3IME1_CLODC
L3_069_049G1_scaffold_499_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13367..14437
DNA (1071bp) protein (357aa)
DNA integrity scanning protein DisA {ECO:0000255|HAMAP-Rule:MF_01438}; Cyclic di-AMP synthase {ECO:0000255|HAMAP-Rule:MF_01438}; Short=c-di-AMP synthase {ECO:0000255|HAMAP-Rule:MF_01438};; Diadenylate cyclase {ECO:0000255|HAMAP-Rule:MF_01438}; EC=2.7.7.85 {ECO:0000255|HAMAP-Rule:MF_01438};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
DNA integrity scanning protein DisA n=174 Tax=Clostridium difficile RepID=DISA_CLOD6
DNA integrity scanning protein DisA
L3_069_049G1_scaffold_499_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14526..15620
DNA (1095bp) protein (365aa)
PIN domain protein n=196 Tax=Clostridium difficile RepID=T2TRP8_CLODI
hypothetical protein
PIN domain protein {ECO:0000313|EMBL:EQG78977.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_049G1_scaffold_499_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15749..17926
DNA (2178bp) protein (726aa)
Putative membrane protein n=2 Tax=Clostridium difficile RepID=T4Q531_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE70972.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative membrane protein
L3_069_049G1_scaffold_499_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18112..18801)
DNA (690bp) protein (230aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH92458.1}; EC=2.1.1.- {ECO:0000313|EMBL:CKH92458.1};; CD00310 protein {ECO:0000313|EMBL:CDF47134.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:CEJ96533.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Transcriptional regulator, AraC family n=133 Tax=Clostridium difficile RepID=Q18CB4_CLOD6
Transcriptional regulator, AraC family
Displaying 15 items

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