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L3_069_049G1_scaffold_535

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_535_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(460..771)
DNA (312bp) protein (104aa)
Uncharacterized protein n=102 Tax=Clostridium difficile RepID=G6BQN7_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL23654.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_049G1_scaffold_535_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(827..1420)
DNA (594bp) protein (198aa)
Nitroreductase {ECO:0000313|EMBL:CKG80452.1}; EC=1.6.99.- {ECO:0000313|EMBL:CKG80452.1};; Putative nitroreductase {ECO:0000313|EMBL:CEJ99856.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Nitroreductase family protein n=176 Tax=Clostridium difficile RepID=C9XRF4_CLODC
nitroreductase
L3_069_049G1_scaffold_535_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1984..2214
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Clostridium difficile RepID=UPI00016C5F07
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG80486.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_049G1_scaffold_535_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2271..2921
DNA (651bp) protein (217aa)
Membrane insertase, YidC/Oxa1 family domain protein n=19 Tax=Clostridium difficile RepID=T2TA08_CLODI
Membrane insertase, YidC/Oxa1 family domain protein {ECO:0000313|EMBL:EQG73875.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L3_069_049G1_scaffold_535_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3135..3806
DNA (672bp) protein (224aa)
Response regulator n=112 Tax=Clostridium difficile RepID=T2T924_CLODI
Response regulator {ECO:0000313|EMBL:EQG73850.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Two-component response regulator
L3_069_049G1_scaffold_535_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3803..4933
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
HAMP domain protein n=34 Tax=Clostridium difficile RepID=T2T9U2_CLODI
Two-component sensor histidine kinase
L3_069_049G1_scaffold_535_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5270..5392
DNA (123bp) protein (41aa)
Uncharacterized protein n=73 Tax=Clostridium difficile RepID=G6BQN2_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG73795.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_069_049G1_scaffold_535_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5389..6234
DNA (846bp) protein (282aa)
Fluoroquinolones export ATP-binding protein n=5 Tax=Clostridium difficile RepID=T3U8S7_CLODI
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EQE59603.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_049G1_scaffold_535_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6234..7262
DNA (1029bp) protein (343aa)
ABC-type transport system, multidrug-family permease n=118 Tax=Clostridium difficile RepID=Q17ZU5_CLOD6
ABC-type transport system, multidrug-familypermease
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE59595.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_049G1_scaffold_535_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7265..8278
DNA (1014bp) protein (338aa)
ABC-2 transporter family protein n=2 Tax=Clostridium difficile RepID=T4Z4S6_CLODI
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE59561.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ABC-type transport system, multidrug-familypermease
L3_069_049G1_scaffold_535_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8795..10045)
DNA (1251bp) protein (417aa)
Sugar (And other) transporter family protein n=2 Tax=Clostridium difficile RepID=T4P7U6_CLODI
cme; Multidrug resistance protein Cme;Transporter,Major Facilitator Superfamily (MFS)
Multidrug resistance protein Cme Transporter,Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CCL23608.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_049G1_scaffold_535_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10131..10877)
DNA (747bp) protein (249aa)
MerR regulatory family protein n=136 Tax=Clostridium difficile RepID=C9XRE6_CLODC
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCL23607.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_049G1_scaffold_535_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11011..12033)
DNA (1023bp) protein (341aa)
Beta-lactamase family protein n=2 Tax=Clostridium difficile RepID=T4PEJ9_CLODI
penicillin-binding protein
Putative penicillin-binding protein {ECO:0000313|EMBL:CCL23606.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_049G1_scaffold_535_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12033..14453)
DNA (2421bp) protein (807aa)
Excinuclease ABC subunit A n=2 Tax=Clostridium difficile RepID=T4PDJ0_CLODI
Putative UvrABC system protein A 2 (UvrA protein 2) (Excinuclease ABC subunit A 2) {ECO:0000313|EMBL:CDS89268.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative UvrABC system protein A 2 (UvrA protein2) (Excinuclease ABC subunit A 2)
L3_069_049G1_scaffold_535_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14539..15459)
DNA (921bp) protein (307aa)
Bacterial regulatory helix-turn-helix s, AraC family protein n=182 Tax=Clostridium difficile RepID=T3G2A8_CLODC
Transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCL23604.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_049G1_scaffold_535_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16060..16602)
DNA (543bp) protein (181aa)
Integrase n=1 Tax=Enterococcus faecium EnGen0057 RepID=L2SKL8_ENTFC
int; Integrase Tn916-like, CTn1-Orf1
Integrase Tn916-like, CTn1-Orf1 {ECO:0000313|EMBL:CCL00196.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Displaying 16 items

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