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L3_069_049G1_scaffold_671

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_671_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2..217)
DNA (216bp) protein (72aa)
UPI0003D62F66 related cluster n=1 Tax=unknown RepID=UPI0003D62F66
General secretory pathway protein E {ECO:0000313|EMBL:ETI86191.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
pilB; type IV pilus assembly protein PilB
L3_069_049G1_scaffold_671_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(538..1449)
DNA (912bp) protein (304aa)
UPI0003D68086 related cluster n=1 Tax=unknown RepID=UPI0003D68086
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
protein-export membrane protein SecF
L3_069_049G1_scaffold_671_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1446..2672)
DNA (1227bp) protein (409aa)
UPI0003D5BFE9 related cluster n=1 Tax=unknown RepID=UPI0003D5BFE9
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
protein-export membrane protein SecD
L3_069_049G1_scaffold_671_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2696..3268)
DNA (573bp) protein (191aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D679EF related cluster n=1 Tax=unknown RepID=UPI0003D679EF
5-formyltetrahydrofolate cyclo-ligase
L3_069_049G1_scaffold_671_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3261..3596)
DNA (336bp) protein (112aa)
UPI0003D5C976 related cluster n=1 Tax=unknown RepID=UPI0003D5C976
Preprotein translocase {ECO:0000313|EMBL:ETI87288.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
preprotein translocase
L3_069_049G1_scaffold_671_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3679..4791)
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D5E75B related cluster n=1 Tax=unknown RepID=UPI0003D5E75B
queuine tRNA-ribosyltransferase
L3_069_049G1_scaffold_671_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4799..5815)
DNA (1017bp) protein (339aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5D2C1 related cluster n=1 Tax=unknown RepID=UPI0003D5D2C1
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
L3_069_049G1_scaffold_671_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5830..7182)
DNA (1353bp) protein (451aa)
UPI0003D64778 related cluster n=1 Tax=unknown RepID=UPI0003D64778
Uncharacterized protein {ECO:0000313|EMBL:KGF07721.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
SpoIID/LytB domain protein
L3_069_049G1_scaffold_671_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7186..7392)
DNA (207bp) protein (69aa)
UPI0003D5AAC3 related cluster n=1 Tax=unknown RepID=UPI0003D5AAC3
Uncharacterized protein {ECO:0000313|EMBL:ETI87411.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
L3_069_049G1_scaffold_671_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7385..8422)
DNA (1038bp) protein (346aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D65022 related cluster n=1 Tax=unknown RepID=UPI0003D65022
Holliday junction DNA helicase RuvB
L3_069_049G1_scaffold_671_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8425..9033)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ruvA; putative Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
UPI0003D5BEC4 related cluster n=1 Tax=unknown RepID=UPI0003D5BEC4
L3_069_049G1_scaffold_671_12
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9030..9527)
DNA (498bp) protein (166aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
UPI0003D5A6FD related cluster n=1 Tax=unknown RepID=UPI0003D5A6FD
crossover junction endodeoxyribonuclease ruvC
L3_069_049G1_scaffold_671_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9676..10713)
DNA (1038bp) protein (346aa)
UPI0003D656A1 related cluster n=1 Tax=unknown RepID=UPI0003D656A1
Uncharacterized protein {ECO:0000313|EMBL:ETI87407.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
3D domain-containing protein
L3_069_049G1_scaffold_671_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11079..11183)
DNA (105bp) protein (35aa)
UPI0003D591B5 related cluster n=1 Tax=unknown RepID=UPI0003D591B5
Uncharacterized protein {ECO:0000313|EMBL:KGF07725.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Displaying 14 items

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