ggKbase home page

L3_069_049G1_scaffold_863

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_863_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1..510
DNA (510bp) protein (170aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
UPI0003D674F5 related cluster n=1 Tax=unknown RepID=UPI0003D674F5
L3_069_049G1_scaffold_863_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

579..1292
DNA (714bp) protein (238aa)
UPI0003D5DD27 related cluster n=1 Tax=unknown RepID=UPI0003D5DD27
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ETI84655.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
protein serine/threonine phosphatase
L3_069_049G1_scaffold_863_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1316..3178
DNA (1863bp) protein (621aa)
UPI0003D5BBBF related cluster n=1 Tax=unknown RepID=UPI0003D5BBBF
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:ETI84656.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
serine/threonine protein kinase with PASTA sensor(s)
L3_069_049G1_scaffold_863_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3178..4059
DNA (882bp) protein (294aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D67568 related cluster n=1 Tax=unknown RepID=UPI0003D67568
ribosome biogenesis GTPase RsgA
L3_069_049G1_scaffold_863_5
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4056..4703
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
UPI0003D68197 related cluster n=1 Tax=unknown RepID=UPI0003D68197
L3_069_049G1_scaffold_863_6
unknown

Not on your lists

comp(4592..4849)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_069_049G1_scaffold_863_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4886..6019
DNA (1134bp) protein (378aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
UPI0003D6260D related cluster n=1 Tax=unknown RepID=UPI0003D6260D
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_069_049G1_scaffold_863_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6004..6648
DNA (645bp) protein (215aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
UPI0003D656B6 related cluster n=1 Tax=unknown RepID=UPI0003D656B6
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ETI84660.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
L3_069_049G1_scaffold_863_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6663..7424
DNA (762bp) protein (254aa)
UPI0003D5B3FD related cluster n=1 Tax=unknown RepID=UPI0003D5B3FD
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
GTP cyclohydrolase II
Displaying 9 items

View Taxonomy