ggKbase home page

L3_069_049G1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_74_1
unknown

Not on your lists

183..395
DNA (213bp) protein (71aa)

This feature has no annotations

L3_069_049G1_scaffold_74_2
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

439..1284
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Actinomyces georgiae F0490 RepID=J1H0L4_9ACTO
uroporphyrin-III C/tetrapyrrole methyltransferase
L3_069_049G1_scaffold_74_3
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1305..1883)
DNA (579bp) protein (193aa)
Nicotinamidase {ECO:0000313|EMBL:EFU61304.1}; EC=3.5.1.19 {ECO:0000313|EMBL:EFU61304.1};; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 180 str. F0310.;"
pncA; putative nicotinamidase (EC:3.5.1.19)
Nicotinamidase n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KRS4_9ACTO
L3_069_049G1_scaffold_74_4
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2018..2953
DNA (936bp) protein (312aa)
aldo/keto reductase (EC:1.1.1.91)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YTA3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ86708.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
L3_069_049G1_scaffold_74_5
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


3011..4816
DNA (1806bp) protein (602aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
Methionine--tRNA ligase n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YUF4_9ACTO
methionyl-tRNA synthetase
L3_069_049G1_scaffold_74_6
unknown

Not on your lists

comp(4830..5132)
DNA (303bp) protein (101aa)

This feature has no annotations

L3_069_049G1_scaffold_74_7
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5143..6522)
DNA (1380bp) protein (460aa)
PspC family transcriptional regulator n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B4DE85
PspC domain protein {ECO:0000313|EMBL:EJG15396.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
PspC domain-containing protein
L3_069_049G1_scaffold_74_8
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6637..7932
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z109_9ACTO
Sensory histidine kinase UhpB {ECO:0000313|EMBL:CRH70579.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
sensor histidine kinase
L3_069_049G1_scaffold_74_9
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7946..8596
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQP6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85793.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
LuxR family transcriptional regulator
L3_069_049G1_scaffold_74_10
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8604..9392)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Actinomyces massiliensis RepID=UPI000312DF69
Uncharacterized protein {ECO:0000313|EMBL:EJF36991.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
L3_069_049G1_scaffold_74_11
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9397..9936)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B58FBB
Uncharacterized protein {ECO:0000313|EMBL:EGQ74420.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0400.;"
L3_069_049G1_scaffold_74_12
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9933..10343)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F1FA
Uncharacterized protein {ECO:0000313|EMBL:EJF37006.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
L3_069_049G1_scaffold_74_13
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10386..11516)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EER8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGQ74418.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0400.;"
hypothetical protein
L3_069_049G1_scaffold_74_14
unknown

Not on your lists

comp(11532..11813)
DNA (282bp) protein (94aa)

This feature has no annotations

L3_069_049G1_scaffold_74_15
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11965..14232
DNA (2268bp) protein (756aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1RHX9_9ACTO
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:ERH33234.1}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 877 str. F0543.;"
metallophosphatase
L3_069_049G1_scaffold_74_16
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14281..16824
DNA (2544bp) protein (848aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
ATP-dependent DNA helicase PcrA n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEU0_9ACTO
ATP-dependent DNA helicase PcrA
L3_069_049G1_scaffold_74_17
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16946..18157
DNA (1212bp) protein (404aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
succinyl-CoA synthetase subunit beta n=1 Tax=Actinomyces sp. ph3 RepID=UPI0003164359
L3_069_049G1_scaffold_74_18
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18184..19104
DNA (921bp) protein (307aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
sucD; succinate--CoA ligase (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X1U6_9ACTO
L3_069_049G1_scaffold_74_19
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19198..20937
DNA (1740bp) protein (580aa)
membrane protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B63BB7
Uncharacterized protein {ECO:0000313|EMBL:KGF00400.1}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
hypothetical protein
L3_069_049G1_scaffold_74_20
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21083..22879
DNA (1797bp) protein (599aa)
purH; IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1R0C5_9ACTO
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 172 str. F0311.;"
L3_069_049G1_scaffold_74_21
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23016..23984
DNA (969bp) protein (323aa)
nisin-resistance protein n=1 Tax=Actinomyces massiliensis RepID=UPI00037502D2
Peptidase, S41 family {ECO:0000313|EMBL:EJF47512.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
nisin-resistance protein
L3_069_049G1_scaffold_74_22
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24170..26464
DNA (2295bp) protein (765aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003623BB3
Periplasmic beta-glucosidase {ECO:0000313|EMBL:GAB95035.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
family 3 glycosyl hydrolase
L3_069_049G1_scaffold_74_23
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26474..28078
DNA (1605bp) protein (535aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YUH4_9ACTO
L3_069_049G1_scaffold_74_24
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28187..33220
DNA (5034bp) protein (1678aa)
DNA helicase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QCF7_9FIRM
DNA helicase
Tax=BJP_IG2069_Clostridiales_48_15
L3_069_049G1_scaffold_74_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33623..33973
DNA (351bp) protein (117aa)
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EFM42020.1}; EC=2.3.1.18 {ECO:0000313|EMBL:EFM42020.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Bacterial transferase hexapeptide repeat protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q5U6_9BIFI
galactoside O-acetyltransferase
L3_069_049G1_scaffold_74_26
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34050..35351
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XU39_PROPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN47823.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
L3_069_049G1_scaffold_74_27
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35409..36353
DNA (945bp) protein (315aa)
Hydrolase, TatD family n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1R0E6_9ACTO
Hydrolase, TatD family {ECO:0000313|EMBL:EWC96604.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
TatD-related deoxyribonuclease
L3_069_049G1_scaffold_74_28
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36501..37628
DNA (1128bp) protein (376aa)
transglycosylase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B45578
Transglycosylase-like domain protein {ECO:0000313|EMBL:EKY16284.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
transglycosylase
L3_069_049G1_scaffold_74_29
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37718..39046
DNA (1329bp) protein (443aa)
lytic transglycosylase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B47D2B
PF03990 domain protein {ECO:0000313|EMBL:EWC96656.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
G5 domain-containing protein
L3_069_049G1_scaffold_74_30
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


39074..40012
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
16S rRNA methyltransferase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B60B4E
dimethyladenosine transferase
Displaying items 1-30 of 92 in total

View Taxonomy