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L3_069_049G1_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_049G1_scaffold_222_1
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(474..2204)
-----------------
DNA (1731bp)
protein (577aa)
Membrane protein ribonuclease BN family protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S1R9_PROA4
membrane protein ribonuclease BN family protein
Membrane protein ribonuclease BN family protein {ECO:0000313|EMBL:AFV88507.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
L3_069_049G1_scaffold_222_2
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2326..2868)
-----------------
DNA (543bp)
protein (181aa)
2''''-5'''' RNA ligase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B774D6
Uncharacterized protein {ECO:0000313|EMBL:ENO18720.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
2'-5' RNA ligase
L3_069_049G1_scaffold_222_3
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3173..4381
-----------------
DNA (1209bp)
protein (403aa)
UTP--hexose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:EEH64134.1}; EC=2.7.7.10 {ECO:0000313|EMBL:EEH64134.1};; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces coleocanis DSM 15436.;"
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZL5_9ACTO
L3_069_049G1_scaffold_222_4
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4383..5684
-----------------
DNA (1302bp)
protein (434aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI000302EF90
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
galactokinase
L3_069_049G1_scaffold_222_5
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5826..6437
-----------------
DNA (612bp)
protein (204aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 17982.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B44E1A
L3_069_049G1_scaffold_222_6
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6532..10209
-----------------
DNA (3678bp)
protein (1226aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
transcription-repair coupling factor n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B62F3B
transcription-repair coupling factor
L3_069_049G1_scaffold_222_7
unknown

Not on your lists

10403..10999
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

L3_069_049G1_scaffold_222_8
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11200..12480
-----------------
DNA (1281bp)
protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W849_9ACTO
L3_069_049G1_scaffold_222_9
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13223..13549
-----------------
DNA (327bp)
protein (109aa)
Septum formation initiator n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1QSI7_9ACTO
Septum formation initiator {ECO:0000313|EMBL:ERH30405.1}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 877 str. F0543.;"
hypothetical protein
L3_069_049G1_scaffold_222_10
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13546..14085
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z0T0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85654.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
hypothetical protein
L3_069_049G1_scaffold_222_11
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14163..15161
-----------------
DNA (999bp)
protein (333aa)
Ppx/GppA family phosphatase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X4U8_9ACTO
Ppx/GppA family phosphatase {ECO:0000313|EMBL:ENO18711.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
Ppx/GppA phosphatase
L3_069_049G1_scaffold_222_12
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15271..16692)
-----------------
DNA (1422bp)
protein (474aa)
sodium:proton antiporter n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B4811C
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
nhaA; Na+/H+ antiporter NhaA
L3_069_049G1_scaffold_222_13
unknown

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16895..17149
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

L3_069_049G1_scaffold_222_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

17271..18230
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YPH6_9ACTO
Predicted membrane protein {ECO:0000313|EMBL:CRH63141.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_069_049G1_scaffold_222_15
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18273..18671
-----------------
DNA (399bp)
protein (133aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
fkbP; FK506-binding protein (EC:5.2.1.8)
peptidylprolyl isomerase n=1 Tax=Actinomyces sp. ph3 RepID=UPI0003055A09
L3_069_049G1_scaffold_222_16
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18802..19422)
-----------------
DNA (621bp)
protein (207aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georgiae F0490.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Actinomyces georgiae F0490 RepID=J0NVN5_9ACTO
L3_069_049G1_scaffold_222_17
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19724..21232
-----------------
DNA (1509bp)
protein (503aa)
Uncharacterized protein n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WFM2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ENO19039.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
integral membrane protein
L3_069_049G1_scaffold_222_18
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21432..21917)
-----------------
DNA (486bp)
protein (162aa)
Transcription elongation factor GreA n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X6N1_9ACTO
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
GreA/GreB family elongation factor
L3_069_049G1_scaffold_222_19
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(22122..22805)
-----------------
DNA (684bp)
protein (228aa)
Hemolysin III family channel protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YPH3_9ACTO
Hemolysin {ECO:0000313|EMBL:CRH92914.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Hly-III family protein
L3_069_049G1_scaffold_222_20
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23054..23815
-----------------
DNA (762bp)
protein (254aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;"
UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Actinomyces RepID=A7B990_9ACTO
L3_069_049G1_scaffold_222_21
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23831..24784)
-----------------
DNA (954bp)
protein (318aa)
Fructokinase {ECO:0000313|EMBL:EFW10253.1}; EC=2.7.1.4 {ECO:0000313|EMBL:EFW10253.1};; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 178 str. F0338.;"
Fructokinase family protein n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1QSN1_9ACTO
PfkB domain-containing protein
L3_069_049G1_scaffold_222_22
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25044..25328)
-----------------
DNA (285bp)
protein (95aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
exodeoxyribonuclease VII n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B54EE1
L3_069_049G1_scaffold_222_23
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25413..26714)
-----------------
DNA (1302bp)
protein (434aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PGX8_9ACTO
exodeoxyribonuclease VII large subunit
L3_069_049G1_scaffold_222_24
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26894..28012
-----------------
DNA (1119bp)
protein (373aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WFL1_9ACTO
L3_069_049G1_scaffold_222_25
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28172..29272
-----------------
DNA (1101bp)
protein (367aa)
Ribosome-binding ATPase YchF n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1R5V0_9ACTO
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 877 str. F0543.;"
GTP-binding protein YchF
L3_069_049G1_scaffold_222_26
Actinobacillus suis, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29415..30320
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Actinobacillus suis H91-0380 RepID=K0GDK6_ACTSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU19805.1}; TaxID=696748 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus suis H91-0380.;"
L3_069_049G1_scaffold_222_27
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30484..31398)
-----------------
DNA (915bp)
protein (305aa)
aldose 1-epimerase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B56809
Aldose 1-epimerase {ECO:0000313|EMBL:EJN53082.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
hypothetical protein
L3_069_049G1_scaffold_222_28
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31747..33312
-----------------
DNA (1566bp)
protein (522aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UEG0_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG74620.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
L3_069_049G1_scaffold_222_29
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33652..35571
-----------------
DNA (1920bp)
protein (640aa)
GTP-binding protein TypA n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PGB5_9ACTO
GTP-binding protein TypA {ECO:0000313|EMBL:EKY14748.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;"
GTP-binding protein TypA
L3_069_049G1_scaffold_222_30
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35651..35836)
-----------------
DNA (186bp)
protein (62aa)
Uncharacterized protein n=1 Tax=Actinomyces georgiae F0490 RepID=J0NSM6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJF47842.1}; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georgiae F0490.;"
Displaying items 1-30 of 67 in total

View Taxonomy