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L3_069_061G1_scaffold_27

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Displaying items 1-30 of 581 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_061G1_scaffold_27_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..166
DNA (165bp) protein (55aa)
Phage antirepressor KilAC domain protein n=1 Tax=Clostridium difficile P46 RepID=T4QN37_CLODI
Putative SPBc2 prophage-derived antirepressor protein yoqD {ECO:0000313|EMBL:CCL24704.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_069_061G1_scaffold_27_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

200..376
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P68 RepID=U4ZKS7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66001.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_069_061G1_scaffold_27_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(373..630)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T4PSL2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24278.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_069_061G1_scaffold_27_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

689..886
DNA (198bp) protein (66aa)
Helix-turn-helix family protein n=7 Tax=Clostridium difficile RepID=T4PTF9_CLODI
Putative repressor {ECO:0000313|EMBL:CCL32127.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
phage regulatory protein
L3_069_061G1_scaffold_27_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

917..1309
DNA (393bp) protein (131aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=T2YJW2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66009.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_069_061G1_scaffold_27_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1290..1439
DNA (150bp) protein (50aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T2W5F0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24700.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_069_061G1_scaffold_27_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1606..1848
DNA (243bp) protein (81aa)
Putative phage protein n=51 Tax=Clostridium difficile RepID=T2VMJ4_CLODI
Putative phage protein {ECO:0000313|EMBL:CCL24699.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative phage protein
L3_069_061G1_scaffold_27_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1927..2208
DNA (282bp) protein (94aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T2YK75_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE65986.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_061G1_scaffold_27_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2195..2833
DNA (639bp) protein (213aa)
ERF superfamily protein n=2 Tax=Clostridium difficile RepID=T4PTE9_CLODI
Putative phage essential recombination function protein {ECO:0000313|EMBL:CCL24697.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative phage essential recombination functionprotein
L3_069_061G1_scaffold_27_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2852..3742
DNA (891bp) protein (297aa)
DnaD domain protein n=2 Tax=Clostridium difficile RepID=T4ZG29_CLODI
DnaD domain protein {ECO:0000313|EMBL:EQI00412.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
putative phage replication protein
L3_069_061G1_scaffold_27_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3762..4181
DNA (420bp) protein (140aa)
Single-stranded DNA-binding protein n=30 Tax=Clostridium difficile RepID=T2W4H1_CLODI
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ssb; single-strand binding protein
L3_069_061G1_scaffold_27_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4211..4573
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PLC5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS84654.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_061G1_scaffold_27_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4573..4707
DNA (135bp) protein (45aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=T2UED0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66035.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_061G1_scaffold_27_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4691..4810
DNA (120bp) protein (40aa)
Putative phage protein n=2 Tax=Clostridium difficile RepID=T4PTD6_CLODI
Putative phage protein {ECO:0000313|EMBL:EQH99938.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
putative phage protein
L3_069_061G1_scaffold_27_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4986..5183
DNA (198bp) protein (66aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=T2V3I3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE66018.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_069_061G1_scaffold_27_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5210..5626
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PLB0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS84663.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_069_061G1_scaffold_27_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5645..6145
DNA (501bp) protein (167aa)
Uncharacterized protein n=54 Tax=Clostridium difficile RepID=T2V0Q5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS83033.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_069_061G1_scaffold_27_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6427..6540
DNA (114bp) protein (38aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=U3VXF8_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE65996.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_069_061G1_scaffold_27_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6555..6731
DNA (177bp) protein (59aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=T2VQP1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24328.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative PemI
L3_069_061G1_scaffold_27_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7267..8307
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PLA5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEC91306.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_069_061G1_scaffold_27_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8332..9768
DNA (1437bp) protein (479aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PSG8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEC91305.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_069_061G1_scaffold_27_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9880..10539
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4ZFA0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF23660.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L3_069_061G1_scaffold_27_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10550..11281
DNA (732bp) protein (244aa)
ATPase subunit of terminase family protein n=2 Tax=Clostridium difficile RepID=T4PS78_CLODI
ATPase subunit of terminase family protein {ECO:0000313|EMBL:EQG75659.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative phage DNA-binding protein
L3_069_061G1_scaffold_27_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11259..12512
DNA (1254bp) protein (418aa)
Phage terminase, large subunit, PBSX family n=3 Tax=Clostridium difficile RepID=T4ZG26_CLODI
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EHJ27716.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
phage terminase large subunit
L3_069_061G1_scaffold_27_25
Clostridium phage phiMMP01, Caudovirales, Viruses

Not on your lists

12518..13957
DNA (1440bp) protein (480aa)
Phage portal protein, SPP1 family n=2 Tax=Clostridium difficile RepID=T4PL99_CLODI
Phage portal protein, SPP1 family {ECO:0000313|EMBL:CEK40757.1}; TaxID=1582156 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage phiMMP01.;"
putative phage portal protein
L3_069_061G1_scaffold_27_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13947..15440
DNA (1494bp) protein (498aa)
Phage protein F-like protein n=21 Tax=Clostridium difficile RepID=G6BAT2_CLODI
head protein
Putative phage head protein {ECO:0000313|EMBL:CAJ69811.1}; Putative phage minor head protein {ECO:0000313|EMBL:CAJ67783.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_069_061G1_scaffold_27_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15406..15648
DNA (243bp) protein (81aa)
Uncharacterized protein n=67 Tax=Clostridium difficile RepID=T3CM96_CLODI
Putative phage protein {ECO:0000313|EMBL:CDS92708.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG89220.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS85253.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
putative phage protein
L3_069_061G1_scaffold_27_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15958..16521
DNA (564bp) protein (188aa)
Phage minor structural GP20 family protein n=2 Tax=Clostridium difficile RepID=T4PS72_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27720.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
putative phage scaffold protein
L3_069_061G1_scaffold_27_29
Clostridium phage phiMMP03, Caudovirales, Viruses

Not on your lists

16533..17432
DNA (900bp) protein (300aa)
Putative phage major capsid protein n=2 Tax=Clostridium difficile RepID=T4PS56_CLODI
Capsid protein {ECO:0000313|EMBL:CEK40842.1}; TaxID=1582157 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Clostridium phage phiMMP03.;"
putative phage major capsid protein
L3_069_061G1_scaffold_27_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17432..17665
DNA (234bp) protein (78aa)
Putative phage protein n=6 Tax=Clostridium difficile RepID=T2UTE2_CLODI
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CDT82495.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG89325.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 581 in total

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