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L3_069_061G1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 419 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_061G1_scaffold_2_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(334..975)
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
uracil phosphoribosyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B609CA
L3_069_061G1_scaffold_2_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1111..2022
DNA (912bp) protein (304aa)
transcriptional regulator n=1 Tax=Varibaculum cambriense RepID=UPI0003B4C66D
Uncharacterized protein {ECO:0000313|EMBL:ETI81720.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_2_3
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2053..2739
DNA (687bp) protein (229aa)
short-chain dehydrogenase n=2 Tax=Varibaculum cambriense RepID=UPI0003B39562
Uncharacterized protein {ECO:0000313|EMBL:EPD30514.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
short chain dehydrogenase
L3_069_061G1_scaffold_2_4
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2736..3734)
DNA (999bp) protein (333aa)
sugar phosphate isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B568F0
Sugar (Xylose) phosphate isomerase/epimerase {ECO:0000313|EMBL:CEI28176.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
xylose phosphate isomerase/epimerase
L3_069_061G1_scaffold_2_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3761..4945)
DNA (1185bp) protein (395aa)
dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5E8A9
Uncharacterized protein {ECO:0000313|EMBL:ETI81725.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
inositol 2-dehydrogenase
L3_069_061G1_scaffold_2_6
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5208..6887)
DNA (1680bp) protein (560aa)
major facilitator transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B5E2D1
IolT2 (Myo-inositol transporter iolT2) {ECO:0000313|EMBL:CEH00038.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;"
iolT2; myo-inositol transporter
L3_069_061G1_scaffold_2_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7134..8150
DNA (1017bp) protein (339aa)
UPI0003D65FCB related cluster n=1 Tax=unknown RepID=UPI0003D65FCB
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI81726.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transcriptional regulator, LacI family (HTH-type transcriptional regulator degA)
L3_069_061G1_scaffold_2_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8420..10081)
DNA (1662bp) protein (554aa)
major facilitator transporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F437
Uncharacterized protein {ECO:0000313|EMBL:ETI81729.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
MFS family major facilitator transporter
L3_069_061G1_scaffold_2_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10113..11123)
DNA (1011bp) protein (337aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
inositol 2-dehydrogenase (EC:1.1.1.18)
inositol 2-dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B7B180
L3_069_061G1_scaffold_2_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11256..12191)
DNA (936bp) protein (312aa)
xylose isomerase domain-containing protein (EC:4.2.1.44)
myo-inosose-2 dehydratase n=1 Tax=Varibaculum cambriense RepID=UPI0003B489C6
Uncharacterized protein {ECO:0000313|EMBL:ETI81731.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_2_11
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12541..12978)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002DDF81A
GtrA-like protein {ECO:0000313|EMBL:CRH92259.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_069_061G1_scaffold_2_12
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12975..13916)
DNA (942bp) protein (314aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PGC8_9ACTO
Glycosyltransferase {ECO:0000313|EMBL:CRH92258.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
family 2 glycosyl transferase
L3_069_061G1_scaffold_2_13
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13916..14761)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YU06_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ87382.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
L3_069_061G1_scaffold_2_14
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14722..15399)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YU06_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ87382.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
hypothetical protein
L3_069_061G1_scaffold_2_15
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15454..15843)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B403F2
Uncharacterized protein {ECO:0000313|EMBL:EPD33989.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
hypothetical protein
L3_069_061G1_scaffold_2_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15849..16262)
DNA (414bp) protein (138aa)
UPI0003D5F5C9 related cluster n=1 Tax=unknown RepID=UPI0003D5F5C9
Uncharacterized protein {ECO:0000313|EMBL:ETI81732.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_2_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16272..16946)
DNA (675bp) protein (225aa)
glycosyl transferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B305A1
Putative glycosyl transferase {ECO:0000313|EMBL:GAD35626.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
glycosyl transferase
L3_069_061G1_scaffold_2_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17130..18236
DNA (1107bp) protein (369aa)
stsC; pyridoxal-phosphate-dependent aminotransferase (EC:2.6.1.50)
UPI0003D5BE41 related cluster n=1 Tax=unknown RepID=UPI0003D5BE41
Uncharacterized protein {ECO:0000313|EMBL:ETI81734.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_2_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18240..19205
DNA (966bp) protein (322aa)
UPI0003D5BFC0 related cluster n=1 Tax=unknown RepID=UPI0003D5BFC0
Uncharacterized protein {ECO:0000313|EMBL:ETI81735.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
dehydrogenase
L3_069_061G1_scaffold_2_20
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(19726..21132)
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBH3_9CLOT
Uncharacterised protein {ECO:0000313|EMBL:CRH87266.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_069_061G1_scaffold_2_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22180..22416
DNA (237bp) protein (79aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B30E34
Uncharacterized protein {ECO:0000313|EMBL:ETI81740.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_2_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22452..22874
DNA (423bp) protein (141aa)
UPI0003D67A0E related cluster n=1 Tax=unknown RepID=UPI0003D67A0E
Uncharacterized protein {ECO:0000313|EMBL:ETI81740.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UDP-N-acetylglucosamine 2-epimerase
L3_069_061G1_scaffold_2_23
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23071..24246
DNA (1176bp) protein (392aa)
glycosyltransferase n=1 Tax=Actinomyces oris RepID=UPI0002003576
Predicted glycosyltransferase {ECO:0000313|EMBL:EAR24820.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
glycosyl transferase family protein
L3_069_061G1_scaffold_2_24
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24257..25402)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z0Q9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85614.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
hypothetical protein
L3_069_061G1_scaffold_2_25
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25663..26259)
DNA (597bp) protein (199aa)
acetylglucosamine-1-phosphate uridylyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B47D80
Uncharacterized protein {ECO:0000313|EMBL:EPD34000.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphophilum ACS-093-V-SCH5.;"
acetylglucosamine-1-phosphate uridylyltransferase
L3_069_061G1_scaffold_2_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26326..26952)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B46EC4
Uncharacterized protein {ECO:0000313|EMBL:ETI81747.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_2_27
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26992..28911)
DNA (1920bp) protein (640aa)
Putative peptidoglycan binding domain protein n=1 Tax=Mobiluncus curtisii subsp. holmesii ATCC 35242 RepID=E6M4W6_9ACTO
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EFU81514.1}; TaxID=887899 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii subsp. holmesii ATCC 35242.;"
hypothetical protein
L3_069_061G1_scaffold_2_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29128..30429
DNA (1302bp) protein (434aa)
nucleotide sugar dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4B025
Uncharacterized protein {ECO:0000313|EMBL:ETI81749.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
nucleotide sugar dehydrogenase
L3_069_061G1_scaffold_2_29
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30474..31604
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YRB9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85988.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
group 1 glycosyl transferase
L3_069_061G1_scaffold_2_30
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31818..33110)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YTY4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ87357.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
teichoic acid transporter
Displaying items 1-30 of 419 in total

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