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L3_069_061G1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_061G1_scaffold_11_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76..1266)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
acetate kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B43708
acetate kinase
L3_069_061G1_scaffold_11_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1289..2860)
DNA (1572bp) protein (524aa)
phosphate acetyltransferase (EC:2.3.1.8)
phosphate acetyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B512CF
Uncharacterized protein {ECO:0000313|EMBL:ETI83064.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_11_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2959..4551
DNA (1593bp) protein (531aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B72EF3
L3_069_061G1_scaffold_11_4
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6058..6987
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum F0468 RepID=I0R3Z5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC69275.1}; TaxID=1435056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes TP8.;"
L3_069_061G1_scaffold_11_5
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6977..8122
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEH4_9FIRM
ATPase
ATPase {ECO:0000313|EMBL:AJC69276.1}; TaxID=1435056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes TP8.;"
L3_069_061G1_scaffold_11_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8652..9494
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B72AEA
Uncharacterized protein {ECO:0000313|EMBL:ETI83072.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_11_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9839..10996)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4E864
Uncharacterized protein {ECO:0000313|EMBL:ETI83073.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_11_8
unknown

Not on your lists

comp(10944..11426)
DNA (483bp) protein (161aa)

This feature has no annotations

L3_069_061G1_scaffold_11_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11637..12092
DNA (456bp) protein (152aa)
cupin n=1 Tax=Varibaculum cambriense RepID=UPI0003B30449
Cupin protein {ECO:0000313|EMBL:ETI83076.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
cupin domain-containing protein
L3_069_061G1_scaffold_11_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12261..12569)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B78186
Uncharacterized protein {ECO:0000313|EMBL:ETI83077.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_11_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12962..16408
DNA (3447bp) protein (1149aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
phosphoribosylformylglycinamidine synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5DE67
Uncharacterized protein {ECO:0000313|EMBL:ETI83078.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_11_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16399..16869
DNA (471bp) protein (157aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
purE; N5-carboxyaminoimidazole ribonucleotide mutase PurE (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Varibaculum cambriense RepID=UPI0003B7667C
L3_069_061G1_scaffold_11_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16900..17610
DNA (711bp) protein (237aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B36F8E
L3_069_061G1_scaffold_11_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17696..18679
DNA (984bp) protein (328aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoribosylaminoimidazole synthetase n=1 Tax=Varibaculum cambriense RepID=UPI0003B35777
phosphoribosylformylglycinamidine cyclo-ligase
L3_069_061G1_scaffold_11_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18719..19912
DNA (1194bp) protein (398aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphoribosylamine/glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Varibaculum cambriense RepID=UPI0003B6DE2F
L3_069_061G1_scaffold_11_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19922..21373
DNA (1452bp) protein (484aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
amidophosphoribosyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4F4CE
amidophosphoribosyltransferase
L3_069_061G1_scaffold_11_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21440..22399)
DNA (960bp) protein (320aa)
permease n=1 Tax=Varibaculum cambriense RepID=UPI0003B315DA
Uncharacterized protein {ECO:0000313|EMBL:ETI83084.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
permease
L3_069_061G1_scaffold_11_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22647..23687
DNA (1041bp) protein (347aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
aspartate carbamoyltransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4E1F9
Uncharacterized protein {ECO:0000313|EMBL:ETI83085.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_11_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23778..25262)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6B15F
Uncharacterized protein {ECO:0000313|EMBL:ETI83086.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_11_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25475..26296
DNA (822bp) protein (274aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B46AAF
hypothetical protein
L3_069_061G1_scaffold_11_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26308..27039
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B73B60
Uncharacterized protein {ECO:0000313|EMBL:ETI83088.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_11_22
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27067..28404)
DNA (1338bp) protein (446aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.4)
glutamate dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4144A
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L3_069_061G1_scaffold_11_23
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28671..30632
DNA (1962bp) protein (654aa)
excinuclease ABC subunit C n=1 Tax=Varibaculum cambriense RepID=UPI0003B511EE
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
excinuclease ABC subunit C
L3_069_061G1_scaffold_11_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30662..31615
DNA (954bp) protein (318aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Varibaculum cambriense RepID=UPI0003B64415
Nucleotide-binding protein Q618_VCMC00001G0672 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ATP-binding protein
L3_069_061G1_scaffold_11_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31612..32610
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B7203E
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_11_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32673..33650
DNA (978bp) protein (326aa)
sporulation protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B7B450
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L3_069_061G1_scaffold_11_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33872..34879
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
gapA2; Glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B531B0
L3_069_061G1_scaffold_11_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34988..36184
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
phosphoglycerate kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4222F
L3_069_061G1_scaffold_11_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36189..36962
DNA (774bp) protein (258aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tpiA; triose-phosphate isomerase (EC:5.3.1.1)
triosephosphate isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5CB30
L3_069_061G1_scaffold_11_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37092..37340
DNA (249bp) protein (83aa)
preprotein translocase subunit SecG n=1 Tax=Varibaculum cambriense RepID=UPI0003B32E81
Preprotein translocase subunit SecG {ECO:0000313|EMBL:ETI83097.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
preprotein translocase subunit SecG
Displaying items 1-30 of 174 in total

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