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L3_069_061G1_scaffold_368

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_061G1_scaffold_368_1
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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381..2060
DNA (1680bp) protein (560aa)
Bifunctional purine biosynthesis protein PurH n=2 Tax=Proteus mirabilis RepID=C2LF70_PROMI
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
purH; bifunctional purine biosynthesis protein
L3_069_061G1_scaffold_368_2
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2073..3362
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Proteus mirabilis WGLW4 RepID=K1H9U0_PROMI
purD; phosphoribosylamine--glycine ligase
L3_069_061G1_scaffold_368_3
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3386..4078)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Proteus mirabilis RepID=C2LF68_PROMI
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EEI49571.1}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
L3_069_061G1_scaffold_368_4
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4093..4365)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha (HU-2) n=7 Tax=Proteus RepID=B4EYT5_PROMH
hupA; DNA-binding protein HU-alpha (HU-2)
DNA-binding protein HU-alpha {ECO:0000313|EMBL:EST57524.1}; TaxID=1312367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
L3_069_061G1_scaffold_368_5
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4556..5146)
DNA (591bp) protein (197aa)
Uncharacterized protein n=5 Tax=Proteus mirabilis RepID=B4EYT6_PROMH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR45472.1}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_6
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5221..5928)
DNA (708bp) protein (236aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
Endonuclease V n=1 Tax=Proteus mirabilis WGLW6 RepID=K1H636_PROMI
nfi; endonuclease V
L3_069_061G1_scaffold_368_7
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5882..6955)
DNA (1074bp) protein (358aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
Uroporphyrinogen decarboxylase n=4 Tax=Proteus mirabilis RepID=DCUP_PROMH
L3_069_061G1_scaffold_368_8
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7044..7829)
DNA (786bp) protein (262aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
NADH pyrophosphatase n=4 Tax=Proteus mirabilis RepID=B4EYT9_PROMH
nudC; NADH pyrophosphatase
L3_069_061G1_scaffold_368_9
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7977..8657
DNA (681bp) protein (227aa)
Hydrolase n=1 Tax=Proteus mirabilis BB2000 RepID=S5U658_PROMI
hydrolase
HAD hydrolase, family IB {ECO:0000313|EMBL:EEI49565.1}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
L3_069_061G1_scaffold_368_10
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8956..10908
DNA (1953bp) protein (651aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
Phosphomethylpyrimidine synthase n=4 Tax=Proteus mirabilis RepID=B4EYU1_PROMH
thiC; thiamine biosynthesis protein ThiC
L3_069_061G1_scaffold_368_11
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10892..11539
DNA (648bp) protein (216aa)
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000255|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000255|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00097}; Short=TMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00097};; Short=TMP-PPase {ECO:0000255|HAMAP-Rule:MF_00097};; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
thiamine-phosphate pyrophosphorylase n=1 Tax=Proteus mirabilis RepID=UPI0003171E4E
L3_069_061G1_scaffold_368_12
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11533..12282
DNA (750bp) protein (250aa)
ThiF family protein {ECO:0000313|EMBL:EEI49562.1}; EC=2.7.7.- {ECO:0000313|EMBL:EEI49562.1};; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
thiF; thiamine biosynthesis adenylyltransferase (EC:2.7.7.-)
ThiF family protein n=2 Tax=Proteus mirabilis RepID=C2LF59_PROMI
L3_069_061G1_scaffold_368_13
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12279..12479
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein n=3 Tax=Proteus mirabilis RepID=B4EYU4_PROMH
thiS; thiamine biosynthesis protein
Thiamine biosynthesis protein {ECO:0000313|EMBL:CAR45485.1}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_14
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12481..13260
DNA (780bp) protein (260aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
Thiazole synthase n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LF57_PROMI
thiG; thiazole biosynthesis
L3_069_061G1_scaffold_368_15
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13260..14378
DNA (1119bp) protein (373aa)
Thiazole biosynthesis protein n=2 Tax=Proteus mirabilis RepID=B4EYU6_PROMH
thiH; thiamine biosynthesis protein ThiH
Thiazole biosynthesis protein {ECO:0000313|EMBL:CAR45488.1}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_16
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14537..15529)
DNA (993bp) protein (331aa)
transposase n=1 Tax=Proteus mirabilis RepID=UPI0002F7F9DA
Uncharacterized protein {ECO:0000313|EMBL:EEI49558.1}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
transposase/plasmid-related protein
L3_069_061G1_scaffold_368_17
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15722..19951)
DNA (4230bp) protein (1410aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
DNA-directed RNA polymerase subunit beta' n=5 Tax=Proteus mirabilis RepID=B4EYU8_PROMH
rpoC; DNA-directed RNA polymerase subunit beta'
L3_069_061G1_scaffold_368_18
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20074..24102)
DNA (4029bp) protein (1343aa)
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=11 Tax=Proteus RepID=RPOB_PROMH
L3_069_061G1_scaffold_368_19
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24455..24820)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=5 Tax=Proteus mirabilis RepID=RL7_PROMH
rplL; 50S ribosomal subunit protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_20
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24884..25381)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=5 Tax=Proteus mirabilis RepID=RL10_PROMH
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_21
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25709..26410)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 n=5 Tax=Proteus mirabilis RepID=RL1_PROMH
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_22
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26415..26843)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=5 Tax=Proteus mirabilis RepID=RL11_PROMH
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_23
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26989..27534)
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=7 Tax=Proteus RepID=B4EYV4_PROMH
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
L3_069_061G1_scaffold_368_24
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27542..27919)
DNA (378bp) protein (126aa)
Protein translocase subunit SecE n=4 Tax=Proteus mirabilis RepID=B4EYV5_PROMH
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=525369 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis ATCC 29906.;"
L3_069_061G1_scaffold_368_25
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28192..28287)
DNA (96bp) protein (32aa)
Elongation factor Tu n=3 Tax=Proteus mirabilis RepID=B4EYV6_PROMH
tufB; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=529507 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis (strain HI4320).;"
Displaying 25 items

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