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L3_069_242G1_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 253 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_6_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AGZ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85611.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_6_2
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1242..7673
DNA (6432bp) protein (2144aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LEM2_PARD8
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:KKB57305.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_069_242G1_scaffold_6_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7892..9436)
DNA (1545bp) protein (515aa)
Arylsulfatase n=3 Tax=Parabacteroides RepID=A7AGZ7_9PORP
Arylsulfatase {ECO:0000313|EMBL:EDN85614.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
secreted sulfatase ydeN
L3_069_242G1_scaffold_6_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9551..10585)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AGZ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85615.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Fe-S center ferredoxin
L3_069_242G1_scaffold_6_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10701..11816)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YGK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12717.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_069_242G1_scaffold_6_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11926..13500)
DNA (1575bp) protein (525aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=2 Tax=Parabacteroides merdae RepID=A7AH00_9PORP
L3_069_242G1_scaffold_6_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13703..14404
DNA (702bp) protein (234aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AH01_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85618.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_6_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14541..14960
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEG1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14716.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_6_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14980..15360
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZMJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12721.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_069_242G1_scaffold_6_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15371..16714
DNA (1344bp) protein (448aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6E8_9PORP
alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
L3_069_242G1_scaffold_6_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


17135..18679
DNA (1545bp) protein (515aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=3 Tax=Parabacteroides RepID=A7AH07_9PORP
L3_069_242G1_scaffold_6_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18684..19250
DNA (567bp) protein (189aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Parabacteroides RepID=A7AH08_9PORP
hypothetical protein
L3_069_242G1_scaffold_6_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19317..19904)
DNA (588bp) protein (196aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AH09_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85626.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane protein
L3_069_242G1_scaffold_6_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20456..21040
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AH11_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN85628.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase sigma-70 factor
L3_069_242G1_scaffold_6_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21114..22091
DNA (978bp) protein (326aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6E4_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD14709.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
sigma factor regulatory protein, FecR/PupR family
L3_069_242G1_scaffold_6_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22215..22448
DNA (234bp) protein (78aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTQ0_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD14708.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
collagen-binding protein
L3_069_242G1_scaffold_6_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22414..22965
DNA (552bp) protein (184aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTQ0_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD14708.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-linked outer membrane protein, SusC/RagA family
L3_069_242G1_scaffold_6_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23856..24338
DNA (483bp) protein (161aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7B6M3_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN11317.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase ECF-type sigma factor
L3_069_242G1_scaffold_6_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24395..25444
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZIP0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11316.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
anti-sigma factor
L3_069_242G1_scaffold_6_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25626..29078
DNA (3453bp) protein (1151aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Parabacteroides sp. D13 RepID=C7XCT2_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU50632.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_069_242G1_scaffold_6_21
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29091..30740
DNA (1650bp) protein (550aa)
SusD family protein n=2 Tax=Parabacteroides RepID=E1YT48_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50019.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
L3_069_242G1_scaffold_6_22
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30750..32090
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYP8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01445.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
oxidoreductase domain-containing protein
L3_069_242G1_scaffold_6_23
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32118..33452
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYP7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01444.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
glucose/galactose transporter
L3_069_242G1_scaffold_6_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33455..34639
DNA (1185bp) protein (395aa)
N-acetylglucosamine-6-phosphate deacetylase id=3503800 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
N-acetylglucosamine-6-phosphate deacetylase
Tax=GWC2_Bacteroidetes_46_850_curated
L3_069_242G1_scaffold_6_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34651..35421
DNA (771bp) protein (257aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370C7AF
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:EIY59337.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_069_242G1_scaffold_6_26
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35436..36443
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYQ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01450.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
dehydrogenase
L3_069_242G1_scaffold_6_27
unknown

Not on your lists

36457..36576
DNA (120bp) protein (40aa)

This feature has no annotations

L3_069_242G1_scaffold_6_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36817..37629
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AH25_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85642.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
xylanase
L3_069_242G1_scaffold_6_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37642..38883
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XFE8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15031.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_242G1_scaffold_6_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38926..39417
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AAM5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12733.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Displaying items 1-30 of 253 in total

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