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L3_069_242G1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_30_1
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

670..966
DNA (297bp) protein (99aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=G4Q8B1_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22442.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_2
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

963..1313
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=G4Q8B0_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22441.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_3
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1273..1530
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GVB6_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL84703.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L3_069_242G1_scaffold_30_4
unknown

Not on your lists

1820..2278
DNA (459bp) protein (153aa)

This feature has no annotations

L3_069_242G1_scaffold_30_5
Veillonella ratti, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2669..2884
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. HPA0509 RepID=S2ZPB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKU78362.1}; TaxID=883156 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella ratti ACS-216-V-Col6b.;"
L3_069_242G1_scaffold_30_6
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3781..4479
DNA (699bp) protein (233aa)
Two-component system transcriptional regulator n=3 Tax=Acidaminococcus RepID=R6M1M5_9FIRM
Two-component system transcriptional regulator {ECO:0000313|EMBL:CDB93518.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
resD; two-component system transcriptional regulator
L3_069_242G1_scaffold_30_7
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4476..6113
DNA (1638bp) protein (546aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
phoR; two-component system sensor histidine kinase (EC:2.7.13.3)
GHKL domain protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2VVL7_9FIRM
L3_069_242G1_scaffold_30_8
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6119..7423
DNA (1305bp) protein (435aa)
Peptidase n=3 Tax=Acidaminococcus RepID=R6MGZ2_9FIRM
Peptidase {ECO:0000313|EMBL:CDB93516.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
peptidase
L3_069_242G1_scaffold_30_9
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7576..7911
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q8T1_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22514.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_10
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7908..8843
DNA (936bp) protein (312aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acidaminococcus sp. HPA0509 RepID=S2ZC79_9FIRM
L3_069_242G1_scaffold_30_11
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9011..12037
DNA (3027bp) protein (1009aa)
Uncharacterized protein n=1 Tax=Acidaminococcus intestini (strain RyC-MR95) RepID=G4Q8S9_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22512.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_12
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12030..15362
DNA (3333bp) protein (1111aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Uncharacterized protein n=1 Tax=Acidaminococcus sp. HPA0509 RepID=S2ZJ59_9FIRM
UvrD/REP helicase
L3_069_242G1_scaffold_30_13
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15531..16400)
DNA (870bp) protein (290aa)
Transcriptional regulator n=3 Tax=Acidaminococcus RepID=G4Q8S7_ACIIR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEQ22510.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_14
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16529..17317
DNA (789bp) protein (263aa)
Phenazine biosynthesis protein n=4 Tax=Acidaminococcus RepID=G4Q8S6_ACIIR
phenazine biosynthesis protein
Phenazine biosynthesis protein {ECO:0000313|EMBL:CDB93496.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
L3_069_242G1_scaffold_30_15
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17318..18511
DNA (1194bp) protein (398aa)
Major facilitator transporter n=3 Tax=Acidaminococcus RepID=G4Q8S5_ACIIR
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AEQ22508.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_16
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19802..20722)
DNA (921bp) protein (307aa)
Transcriptional regulator n=4 Tax=Acidaminococcus RepID=G4Q8S4_ACIIR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEQ22507.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_17
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20829..21659)
DNA (831bp) protein (277aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q8S3_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22506.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_18
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21656..22918)
DNA (1263bp) protein (421aa)
Sodium-dicarboxylate symporter n=5 Tax=Acidaminococcus RepID=G4Q8S2_ACIIR
dctA; sodium-dicarboxylate symporter
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:ERL16584.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_069_242G1_scaffold_30_19
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24127..24381
DNA (255bp) protein (85aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Megasphaera elsdenii DSM 20460 RepID=G0VPP4_MEGEL
RNA-directed DNA polymerase (Reverse transcriptase)
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:CCC73422.1}; TaxID=1064535 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera elsdenii DSM 20460.;"
L3_069_242G1_scaffold_30_20
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24378..25367
DNA (990bp) protein (330aa)
RNA-directed DNA polymerase n=4 Tax=Acidaminococcus RepID=G4Q8S0_ACIIR
RNA-directed DNA polymerase
RNA-directed DNA polymerase {ECO:0000313|EMBL:AEQ22503.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_21
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25585..26133)
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Acidaminococcus RepID=G4Q8R9_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22502.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_22
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26312..27685
DNA (1374bp) protein (458aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=S2ZJ67_9FIRM
GntR-family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ERL16597.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_069_242G1_scaffold_30_23
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27834..28625
DNA (792bp) protein (264aa)
Phenazine biosynthesis protein n=5 Tax=Acidaminococcus RepID=G4Q8R7_ACIIR
phenazine biosynthesis protein
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ERL16621.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_069_242G1_scaffold_30_24
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28674..29048
DNA (375bp) protein (125aa)
Uncharacterized protein n=5 Tax=Acidaminococcus RepID=G4Q8R6_ACIIR
Uncharacterized protein {ECO:0000313|EMBL:CDB93007.1}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
hypothetical protein
L3_069_242G1_scaffold_30_25
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29088..30068
DNA (981bp) protein (327aa)
Quinone oxidoreductase n=5 Tax=Acidaminococcus RepID=G4Q8R5_ACIIR
quinone oxidoreductase
Quinone oxidoreductase {ECO:0000313|EMBL:AEQ22498.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_26
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30529..30738
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Acidaminococcus RepID=G4Q8A7_ACIIR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ22438.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_27
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31017..31904
DNA (888bp) protein (296aa)
paaH; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=5 Tax=Acidaminococcus RepID=G4Q8R2_ACIIR
Putative 3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ERL16623.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
L3_069_242G1_scaffold_30_28
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31996..32967)
DNA (972bp) protein (324aa)
BASS-family bile acid-sodium transporter n=4 Tax=Acidaminococcus RepID=G4Q8R1_ACIIR
BASS-family bile acid-sodium transporter
BASS-family bile acid-sodium transporter {ECO:0000313|EMBL:AEQ22494.1}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
L3_069_242G1_scaffold_30_29
Acidaminococcus intestini CAG:325, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32967..33353)
DNA (387bp) protein (129aa)
panD; aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263033 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus intestini CAG:325.;"
Aspartate 1-decarboxylase n=4 Tax=Acidaminococcus RepID=G4Q8R0_ACIIR
L3_069_242G1_scaffold_30_30
Acidaminococcus intestini, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(33350..34207)
DNA (858bp) protein (286aa)
panC; pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=568816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus intestini (strain RyC-MR95).;"
Pantothenate synthetase n=5 Tax=Acidaminococcus RepID=G4Q8Q9_ACIIR
Displaying items 1-30 of 155 in total

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