ggKbase home page

L3_069_242G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_47_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(205..1044)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13113.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_47_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1235..2035
DNA (801bp) protein (267aa)
Polysaccharide biosynthesis/export protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1V4_9PORP
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:CDD13114.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
polysaccharide export outer membrane protein
L3_069_242G1_scaffold_47_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2037..3641
DNA (1605bp) protein (535aa)
Chain length determinant protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUY7_9PORP
Chain length determinant protein {ECO:0000313|EMBL:CDD13115.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tyrosine-protein kinase
L3_069_242G1_scaffold_47_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3649..5457
DNA (1809bp) protein (603aa)
Aminotransferase class I/II n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X9X2_9PORP
Aminotransferase class I/II {ECO:0000313|EMBL:CDD13116.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hemolysin erythrocyte lysis protein 2
L3_069_242G1_scaffold_47_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5476..6414
DNA (939bp) protein (313aa)
Ornithine cyclodeaminase/mu-crystallin family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y400_9PORP
Ornithine cyclodeaminase/mu-crystallin family protein {ECO:0000313|EMBL:CDD13117.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ornithine cyclodeaminase/mu-crystallin
L3_069_242G1_scaffold_47_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6516..7691
DNA (1176bp) protein (392aa)
Polysaccharide biosynthesis protein n=2 Tax=Parabacteroides merdae RepID=A7ACE1_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDN87543.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
membrane protein
L3_069_242G1_scaffold_47_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7678..8469
DNA (792bp) protein (264aa)
LICD family protein n=4 Tax=Parabacteroides RepID=A7ACE0_9PORP
LICD family protein {ECO:0000313|EMBL:CDD13119.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cholinephosphotransferase
L3_069_242G1_scaffold_47_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8481..9647
DNA (1167bp) protein (389aa)
UDP-N-Acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=3 Tax=Parabacteroides RepID=A7ACD9_9PORP
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDD13120.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_242G1_scaffold_47_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9657..10838
DNA (1182bp) protein (394aa)
Glycosyltransferase group 1 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X9X7_9PORP
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD13121.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_47_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10850..11842
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y405_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13122.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_47_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11831..12925)
DNA (1095bp) protein (365aa)
Glycosyltransferase, group 1 family protein n=2 Tax=Parabacteroides merdae RepID=A7AHH9_9PORP
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN85796.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycosyltransferase, group 1 family protein
L3_069_242G1_scaffold_47_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12922..14148)
DNA (1227bp) protein (409aa)
Glycosyltransferase group 1 family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X1W5_9PORP
Glycosyltransferase group 1 family protein {ECO:0000313|EMBL:CDD13124.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_069_242G1_scaffold_47_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14145..15359)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHI1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85798.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_47_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15486..16796)
DNA (1311bp) protein (437aa)
Ser/Thr phosphatase family protein n=2 Tax=Parabacteroides merdae RepID=A7AHI2_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDN85799.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_47_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17269..17835)
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=4 Tax=Parabacteroides RepID=A7AHI4_9PORP
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_47_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17842..18366)
DNA (525bp) protein (175aa)
Nitroreductase family protein n=2 Tax=Parabacteroides merdae RepID=A7AHI5_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:EDN85802.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
nitroreductase
L3_069_242G1_scaffold_47_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18363..19316)
DNA (954bp) protein (318aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Parabacteroides merdae RepID=A7AHI6_9PORP
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN85803.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycosyl transferase family protein
L3_069_242G1_scaffold_47_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19337..19867)
DNA (531bp) protein (177aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AHI7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85804.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_47_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20357..20497
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AHI8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85805.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_47_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20469..21875
DNA (1407bp) protein (469aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Amidophosphoribosyltransferase n=4 Tax=Parabacteroides RepID=A7AHI9_9PORP
amidophosphoribosyltransferase
L3_069_242G1_scaffold_47_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21907..23217
DNA (1311bp) protein (437aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AN71_9PORP
L3_069_242G1_scaffold_47_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23235..24320
DNA (1086bp) protein (362aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZN59_9PORP
L3_069_242G1_scaffold_47_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24482..25432
DNA (951bp) protein (317aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHJ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85809.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sodium-dependent transporter
L3_069_242G1_scaffold_47_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25441..25938)
DNA (498bp) protein (166aa)
Acetyltransferase, GNAT family n=2 Tax=Parabacteroides merdae RepID=A7AHJ4_9PORP
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDN85812.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
sortase
L3_069_242G1_scaffold_47_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26024..26461
DNA (438bp) protein (146aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AHJ6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12186.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_47_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26647..27747
DNA (1101bp) protein (367aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AHJ7_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN85814.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Tat pathway signal sequence domain-containing protein
L3_069_242G1_scaffold_47_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27856..29169)
DNA (1314bp) protein (438aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=4 Tax=Parabacteroides RepID=A7AHJ8_9PORP
Threonine synthase {ECO:0000313|EMBL:EDN85815.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_47_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29166..30368)
DNA (1203bp) protein (401aa)
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=2 Tax=Parabacteroides merdae RepID=A7AHJ9_9PORP
Putative homoserine kinase {ECO:0000313|EMBL:EDN85816.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_47_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30403..32841)
DNA (2439bp) protein (813aa)
Homoserine dehydrogenase n=2 Tax=Parabacteroides merdae RepID=A7AHK0_9PORP
Homoserine dehydrogenase {ECO:0000313|EMBL:EDN85817.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I
L3_069_242G1_scaffold_47_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33596..36700
DNA (3105bp) protein (1035aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AN82_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN17193.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-dependent receptor plug
Displaying items 1-30 of 125 in total

View Taxonomy