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L3_069_242G1_scaffold_82

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Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_82_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(383..1732)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15856.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted ATPase (AAA+ superfamily)
L3_069_242G1_scaffold_82_2
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2002..2850)
DNA (849bp) protein (283aa)
Cof-like hydrolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q523_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EKY22991.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
HAD-superfamily hydrolase, subfamily IIB
L3_069_242G1_scaffold_82_3
unknown

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comp(2927..6838)
DNA (3912bp) protein (1304aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.80)
Beta-fructosidases (Levanase/invertase) {ECO:0000313|EMBL:CBL39539.1}; EC=3.2.1.80 {ECO:0000313|EMBL:CBL39539.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Beta-fructosidases (Levanase/invertase) n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MVX3_9FIRM
L3_069_242G1_scaffold_82_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6923..7207)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P054_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA32313.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L3_069_242G1_scaffold_82_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7223..8059)
DNA (837bp) protein (279aa)
PTS system mannose/fructose/sorbose family IID component n=4 Tax=Clostridiales RepID=B0P055_9CLOT
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EKY22988.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system IID component, Man family (TC 4.A.6)
L3_069_242G1_scaffold_82_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8061..8915)
DNA (855bp) protein (285aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC n=5 Tax=Clostridiales RepID=D4MVX0_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDA32311.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_069_242G1_scaffold_82_7
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8942..9439)
DNA (498bp) protein (166aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system protein n=2 Tax=Lachnospiraceae RepID=E5VML2_9FIRM
PTS system protein {ECO:0000313|EMBL:EFV15862.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_069_242G1_scaffold_82_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9460..9894)
DNA (435bp) protein (145aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose-specific component IIA n=5 Tax=Clostridiales RepID=D4MVW8_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:CDA32309.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_069_242G1_scaffold_82_9
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10057..11376)
DNA (1320bp) protein (440aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P060_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS22068.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_069_242G1_scaffold_82_10
unknown

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comp(11377..12045)
DNA (669bp) protein (223aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Clostridiales RepID=D4MVW6_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CBL39532.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_069_242G1_scaffold_82_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12042..13364)
DNA (1323bp) protein (441aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase n=4 Tax=Clostridiales RepID=B0P062_9CLOT
Histidine kinase {ECO:0000313|EMBL:EKY22982.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_069_242G1_scaffold_82_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13377..14357)
DNA (981bp) protein (327aa)
Ribose transport system substrate-binding protein n=2 Tax=Lachnospiraceae RepID=E5VML7_9FIRM
Ribose transport system substrate-binding protein {ECO:0000313|EMBL:EFV15867.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_069_242G1_scaffold_82_13
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14458..16356)
DNA (1899bp) protein (633aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VML8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:EFV15868.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_069_242G1_scaffold_82_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16431..17504)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Clostridium sp. SS2/1 RepID=B0P065_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
bacterial peptide chain release factor 1 (bRF-1)
L3_069_242G1_scaffold_82_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17506..18357)
DNA (852bp) protein (284aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Release factor glutamine methyltransferase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q4S8_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L3_069_242G1_scaffold_82_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18350..19297)
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5ZDW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32301.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted metal-dependent enzyme
L3_069_242G1_scaffold_82_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19403..19603)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=5 Tax=Clostridiales RepID=D4MVV9_9FIRM
LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_069_242G1_scaffold_82_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19734..21101)
DNA (1368bp) protein (456aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Transcription termination factor Rho n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5I4_9FIRM
transcription termination factor Rho
L3_069_242G1_scaffold_82_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21192..21917)
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q4P9_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
RNA polymerase, sigma subunit, RpoX/SigF
L3_069_242G1_scaffold_82_20
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21910..22338)
DNA (429bp) protein (143aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=3 Tax=Clostridiales RepID=D4MVV6_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CDA32297.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_069_242G1_scaffold_82_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22358..22717)
DNA (360bp) protein (120aa)
Anti-sigma factor antagonist n=5 Tax=Clostridiales RepID=D4MVV5_9FIRM
anti-anti-sigma factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L3_069_242G1_scaffold_82_22
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22821..24020)
DNA (1200bp) protein (400aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P074_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS22082.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Tetratricopeptide repeat.
L3_069_242G1_scaffold_82_23
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24007..25257)
DNA (1251bp) protein (417aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Bifunctional protein FolC n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z6K1_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:CDA32294.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L3_069_242G1_scaffold_82_24
unknown

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comp(25266..26099)
DNA (834bp) protein (278aa)
HAD-superfamily hydrolase, subfamily IIB n=3 Tax=Clostridiales RepID=D4MVV3_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL39519.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L3_069_242G1_scaffold_82_25
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26142..27059)
DNA (918bp) protein (306aa)
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Homoserine O-succinyltransferase n=4 Tax=Clostridiales RepID=D4MVV2_9FIRM
L3_069_242G1_scaffold_82_26
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27168..29123)
DNA (1956bp) protein (652aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5S1_9FIRM
L3_069_242G1_scaffold_82_27
unknown

Not on your lists

comp(29116..29850)
DNA (735bp) protein (245aa)
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBL39517.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Pseudouridine synthase n=4 Tax=Clostridiales RepID=D4MVV1_9FIRM
L3_069_242G1_scaffold_82_28
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29853..31433)
DNA (1581bp) protein (527aa)
Metallo-beta-lactamase superfamily protein n=2 Tax=Lachnospiraceae RepID=E5VMN4_9FIRM
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CDA32289.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_069_242G1_scaffold_82_29
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31446..32606)
DNA (1161bp) protein (387aa)
Acetyltransferase n=2 Tax=Lachnospiraceae RepID=E5VMN5_9FIRM
Acetyltransferase {ECO:0000313|EMBL:CDA32288.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
L3_069_242G1_scaffold_82_30
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32623..33099)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Lachnospiraceae RepID=E5VMN6_9FIRM
Displaying items 1-30 of 93 in total

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