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L3_069_242G1_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_84_1
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2088..2393
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Streptococcus anginosus subsp. whileyi CCUG 39159 RepID=I0S7Z1_STRAP
Uncharacterized protein {ECO:0000313|EMBL:EID19494.1}; TaxID=1095729 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus subsp. whileyi CCUG 39159.;"
L3_069_242G1_scaffold_84_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5072..5224)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIE9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85166.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_84_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5257..6546
DNA (1290bp) protein (430aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85167.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_84_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6606..6977)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIF1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85168.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_84_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7102..8700)
DNA (1599bp) protein (533aa)
Glycosyl hydrolase family 20, catalytic domain protein n=3 Tax=Parabacteroides RepID=A7AIF3_9PORP
Glycosyl hydrolase family 20 catalytic domain protein {ECO:0000313|EMBL:CDD11249.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
beta-N-acetylhexosaminidase
L3_069_242G1_scaffold_84_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9209..9337)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJD7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11248.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_242G1_scaffold_84_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9682..10899)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Y8U1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09682.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L3_069_242G1_scaffold_84_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10918..12627)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZE54_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09681.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RagB/SusD domain-containing protein
L3_069_242G1_scaffold_84_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12654..16169)
DNA (3516bp) protein (1172aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZEL7_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN09680.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
TonB-dependent receptor plug
L3_069_242G1_scaffold_84_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16372..17454)
DNA (1083bp) protein (361aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B500_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEC98489.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
anti-sigma factor
L3_069_242G1_scaffold_84_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17755..18309
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=A7AIG7_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN85184.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase ECF-type sigma factor
L3_069_242G1_scaffold_84_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18558..21374
DNA (2817bp) protein (939aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11234.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_84_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21709..22308)
DNA (600bp) protein (200aa)
Peptidase S54 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XF86_9PORP
Peptidase S54 family {ECO:0000313|EMBL:CDD14986.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_84_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22325..22495
DNA (171bp) protein (57aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZQN0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14987.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_242G1_scaffold_84_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22465..23904
DNA (1440bp) protein (480aa)
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Phospholipase D domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WUJ0_9PORP
cardiolipin synthetase
L3_069_242G1_scaffold_84_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23876..24433)
DNA (558bp) protein (186aa)
RNA methyltransferase RsmD family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7C0_9PORP
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CDD14989.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
methyltransferase
L3_069_242G1_scaffold_84_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24421..25248)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14990.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_84_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25257..25886)
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIH4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85191.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_84_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25980..27407
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y9A3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14992.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
exonuclease V subunit alpha
L3_069_242G1_scaffold_84_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27539..27757)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B2Z1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13812.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_069_242G1_scaffold_84_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27849..28550
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AIH6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85193.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_84_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28633..29337
DNA (705bp) protein (235aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Ribosomal RNA small subunit methyltransferase I n=4 Tax=Parabacteroides RepID=A7AIH7_9PORP
methyltransferase
L3_069_242G1_scaffold_84_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29356..30228
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A604_9PORP
Putative gas vesicle protein GvpC repeat protein {ECO:0000313|EMBL:EDN85195.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_84_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30225..30920
DNA (696bp) protein (232aa)
HAD hydrolase, TIGR02254 family n=4 Tax=Parabacteroides RepID=A7AIH9_9PORP
HAD hydrolase TIGR02254 family {ECO:0000313|EMBL:CDD15022.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
HAD superfamily hydrolase
L3_069_242G1_scaffold_84_25
unknown

Not on your lists

31014..31403
DNA (390bp) protein (130aa)

This feature has no annotations

L3_069_242G1_scaffold_84_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31312..31488)
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AII0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85197.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_84_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31514..33094)
DNA (1581bp) protein (527aa)
Peptide chain release factor 3 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7I1_9PORP
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
peptide chain release factor 3
L3_069_242G1_scaffold_84_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33106..33972)
DNA (867bp) protein (289aa)
dTDP-4-dehydrorhamnose reductase n=3 Tax=Parabacteroides RepID=A7AII2_9PORP
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EDN85199.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
dTDP-4-dehydrorhamnose reductase
L3_069_242G1_scaffold_84_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33979..34527)
DNA (549bp) protein (183aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AII3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85200.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_069_242G1_scaffold_84_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34524..35450)
DNA (927bp) protein (309aa)
Mur ligase middle domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XFD7_9PORP
Mur ligase middle domain protein {ECO:0000313|EMBL:CDD15016.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UDP-N-acetylmuramate-alanine ligase
Displaying items 1-30 of 99 in total

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