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L3_069_242G1_scaffold_121

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_121_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(174..2822)
DNA (2649bp) protein (883aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Alanine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG19_9CLOT
alanyl-tRNA synthetase
L3_069_242G1_scaffold_121_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3040..4401
DNA (1362bp) protein (454aa)
Putative efflux protein, MATE family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E273_9FIRM
putative efflux protein, MATE family
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC17311.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_069_242G1_scaffold_121_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4513..5046
DNA (534bp) protein (178aa)
Multimeric flavodoxin n=3 Tax=Clostridium RepID=N9YT61_9CLOT
Multimeric flavodoxin {ECO:0000313|EMBL:ENZ10967.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Multimeric flavodoxin WrbA
L3_069_242G1_scaffold_121_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5055..5942)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5II64_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58800.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
sugar phosphate isomerase/epimerase
L3_069_242G1_scaffold_121_5
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5939..6760)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=1 Tax=Facklamia languida CCUG 37842 RepID=H3NKR3_9LACT
Uncharacterized protein {ECO:0000313|EMBL:KEZ89009.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
HAD-superfamily hydrolase, subfamily IIB
L3_069_242G1_scaffold_121_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6768..8192)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A996_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ89008.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC-type sugar transport system, periplasmic component
L3_069_242G1_scaffold_121_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8244..9071)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AF36_9CLOT
ABC transporter permease {ECO:0000313|EMBL:KEZ89007.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC-type sugar transport system, permease component
L3_069_242G1_scaffold_121_8
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9061..9936)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AK56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ89006.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L3_069_242G1_scaffold_121_9
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9958..10920)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AEA7_9CLOT
Nucleoside hydrolase {ECO:0000313|EMBL:KEZ89005.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
inosine-uridine preferring nucleoside hydrolase superfamily protein
L3_069_242G1_scaffold_121_10
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11054..11866)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A619_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ24802.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_069_242G1_scaffold_121_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12001..12762)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61662.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_069_242G1_scaffold_121_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12891..13370)
DNA (480bp) protein (160aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D0P5_9CLOT
L3_069_242G1_scaffold_121_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13414..15021)
DNA (1608bp) protein (536aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUG6_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEQ61660.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L3_069_242G1_scaffold_121_14
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15121..16602)
DNA (1482bp) protein (494aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Stage IV sporulation protein A n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JKL6_9CLOT
stage IV sporulation protein A
L3_069_242G1_scaffold_121_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16656..17366)
DNA (711bp) protein (237aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97144.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L3_069_242G1_scaffold_121_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17381..18139)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41029.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter
L3_069_242G1_scaffold_121_17
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18139..19200)
DNA (1062bp) protein (354aa)
Branched-chain amino acid ABC transporter permease n=9 Tax=Clostridium RepID=N9WY54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25335.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-)
L3_069_242G1_scaffold_121_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19211..20092)
DNA (882bp) protein (294aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RUH3_9CLOT
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ENZ33062.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
inner-membrane translocator
L3_069_242G1_scaffold_121_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20176..21384)
DNA (1209bp) protein (403aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=3 Tax=Clostridium RepID=N9YFD3_9CLOT
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ10583.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L3_069_242G1_scaffold_121_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21550..22560)
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG44_9CLOT
L3_069_242G1_scaffold_121_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22593..23225)
DNA (633bp) protein (211aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW87_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_069_242G1_scaffold_121_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23244..24572)
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUF7_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ribosome-associated GTPase EngA
L3_069_242G1_scaffold_121_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24588..26003)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41018.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_069_242G1_scaffold_121_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26238..27422
DNA (1185bp) protein (395aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41017.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_069_242G1_scaffold_121_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27491..28342)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X5G0_9CLOT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
conserved hypothetical protein TIGR00726
L3_069_242G1_scaffold_121_26
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28378..28719)
DNA (342bp) protein (114aa)
UPF0102 protein HMPREF9467_01096 n=9 Tax=Clostridium RepID=G5HWB7_9CLOT
UPF0102 protein BN688_03738 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
conserved hypothetical protein TIGR00252
L3_069_242G1_scaffold_121_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28716..29372)
DNA (657bp) protein (219aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL70_9CLOT
L3_069_242G1_scaffold_121_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29373..30290)
DNA (918bp) protein (306aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IFZ8_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosome biogenesis GTP-binding protein YlqF
L3_069_242G1_scaffold_121_29
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30335..30889)
DNA (555bp) protein (185aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HLK7_9CLOT
signal peptidase I
L3_069_242G1_scaffold_121_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30969..31316)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=7 Tax=Clostridium RepID=A8RUI9_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
50S ribosomal protein L19
Displaying items 1-30 of 88 in total

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