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L3_069_242G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_152_1
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(304..1563)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BK53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD66144.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Predicted ATPase (AAA+ superfamily)
L3_069_242G1_scaffold_152_2
unknown

Not on your lists

comp(2304..2474)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_069_242G1_scaffold_152_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2471..4915)
DNA (2445bp) protein (815aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M405_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CBL25967.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_069_242G1_scaffold_152_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4912..5586)
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B7Z6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG90533.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_069_242G1_scaffold_152_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5723..6988)
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFN8_9FIRM
hypothetical protein
L3_069_242G1_scaffold_152_6
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6964..7653)
DNA (690bp) protein (230aa)
Two-component system, OmpR family, phosphate regulon response regulator OmpR n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2E0_EUBE2
two-component system OmpR family phosphate regulon response regulator OmpR
Two-component system, OmpR family, phosphate regulon response regulator OmpR {ECO:0000313|EMBL:ACR72515.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_069_242G1_scaffold_152_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8045..8287)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYQ0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR76102.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_069_242G1_scaffold_152_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8467..9735
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79773.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted ATPase (AAA+ superfamily)
L3_069_242G1_scaffold_152_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9883..10494)
DNA (612bp) protein (204aa)
HAD superfamily hydrolase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVL8_9FIRM
HAD superfamily hydrolase {ECO:0000313|EMBL:CCZ79774.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HAD superfamily hydrolase
L3_069_242G1_scaffold_152_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10487..12214)
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79775.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_152_11
unknown

Not on your lists

comp(12292..12549)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_069_242G1_scaffold_152_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12641..12964
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V8K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79776.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
rhodanese-like protein
L3_069_242G1_scaffold_152_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12984..13907
DNA (924bp) protein (308aa)
Glycosyl hydrolase family 25 n=1 Tax=Roseburia sp. CAG:18 RepID=R5VG95_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CCZ79777.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
L3_069_242G1_scaffold_152_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13929..15041)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79778.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_152_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15263..15586
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79779.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Predicted transcriptional regulators
L3_069_242G1_scaffold_152_16
unknown

Not on your lists

comp(15686..15982)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_069_242G1_scaffold_152_17
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15960..17240)
DNA (1281bp) protein (427aa)
NDT80/PhoG like DNA-binding family protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QE83_9FIRM
NDT80/PhoG like DNA-binding family protein {ECO:0000313|EMBL:CCZ20531.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
transcriptional regulator
L3_069_242G1_scaffold_152_18
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17404..17730
DNA (327bp) protein (109aa)
18 kDa heat shock protein (HSP 18) n=1 Tax=Clostridium sp. CAG:448 RepID=R6SN48_9CLOT
18 kDa heat shock protein (HSP 18) {ECO:0000313|EMBL:CDC61355.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
heat shock protein Hsp20
L3_069_242G1_scaffold_152_19
Prevotella sp. CAG:1320, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17775..17936
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Prevotella sp. CAG:1320 RepID=R6ED51_9BACT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1262922 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1320.;"
Rubredoxin
L3_069_242G1_scaffold_152_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17986..18186)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62644.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L3_069_242G1_scaffold_152_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18319..19161
DNA (843bp) protein (281aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1F3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE20613.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
xylan 1,4-beta-xylosidase
L3_069_242G1_scaffold_152_22
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(19148..20332)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XPK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14454.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
NuoF; NADH:ubiquinone oxidoreductase, NADH-binding 51 kDa subunit
L3_069_242G1_scaffold_152_23
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20333..22450)
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37987.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_069_242G1_scaffold_152_24
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(22478..23929)
DNA (1452bp) protein (484aa)
fccA2; fumarate reductase flavoprotein subunit FccA (EC:1.3.99.1)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XI30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15173.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_069_242G1_scaffold_152_25
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23939..24991)
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37993.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_069_242G1_scaffold_152_26
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25019..26074)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A4F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ24237.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
xylose isomerase-like TIM barrel
L3_069_242G1_scaffold_152_27
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(26090..26485)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XGC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14583.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L3_069_242G1_scaffold_152_28
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(26505..27617)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YDG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14582.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
oxidoreductase
L3_069_242G1_scaffold_152_29
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(27651..28571)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y036_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14581.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
AP-endonuclease/AP-lyase
L3_069_242G1_scaffold_152_30
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(28758..31169)
DNA (2412bp) protein (804aa)
xynB8; beta-xylosidase XynB (EC:3.2.1.37)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5YDG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA14577.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Displaying items 1-30 of 93 in total

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