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L3_069_242G1_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_169_1
unknown

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1..90
DNA (90bp) protein (30aa)

This feature has no annotations

L3_069_242G1_scaffold_169_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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836..1309
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79172.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_169_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1435..3879)
DNA (2445bp) protein (815aa)
Cellobiose phosphorylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULI9_9FIRM
Cellobiose phosphorylase {ECO:0000313|EMBL:CCZ79173.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosyl transferase family protein
L3_069_242G1_scaffold_169_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4361..5383
DNA (1023bp) protein (341aa)
Transcriptional regulator (LacI family) protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTY9_9FIRM
Transcriptional regulator (LacI family) protein {ECO:0000313|EMBL:CCZ79174.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator (LacI family) protein
L3_069_242G1_scaffold_169_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5445..6854
DNA (1410bp) protein (470aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM89_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCZ79175.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_069_242G1_scaffold_169_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6984..7901
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79176.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_069_242G1_scaffold_169_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7907..8773
DNA (867bp) protein (289aa)
Sugar ABC transporter permease n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEL6_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:CCZ79177.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L3_069_242G1_scaffold_169_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8886..10733)
DNA (1848bp) protein (616aa)
asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULJ3_9FIRM
Asparagine synthetase {ECO:0000313|EMBL:CCZ79178.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_069_242G1_scaffold_169_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10866..11402
DNA (537bp) protein (179aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTZ4_9FIRM
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:CCZ79179.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bi-functional aminoacyl-tRNA synthetase
L3_069_242G1_scaffold_169_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11389..11868)
DNA (480bp) protein (160aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Cytosine/adenosine deaminases n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM93_9FIRM
Cytosine/adenosine deaminases
L3_069_242G1_scaffold_169_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11969..12517
DNA (549bp) protein (183aa)
Acetyltransferases, including N-acetylases of ribosomal proteins (EC:2.3.1.128)
Acetyltransferases including N-acetylases of ribosomal proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6U2_9FIRM
Acetyltransferases including N-acetylases of ribosomal proteins {ECO:0000313|EMBL:CCZ79181.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_069_242G1_scaffold_169_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12504..13436)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79182.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_169_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13612..14001
DNA (390bp) protein (130aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULJ9_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCZ79183.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Fe2+/Zn2+ uptake regulation proteins
L3_069_242G1_scaffold_169_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14031..14573
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UTZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79184.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ferredoxin hydrogenase
L3_069_242G1_scaffold_169_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14772..15503
DNA (732bp) protein (244aa)
Bacterial group 2 Ig-like protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM97_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCZ79185.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_169_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15693..17726
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79186.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_169_17
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17924..20089
DNA (2166bp) protein (722aa)
Alpha-galactosidase n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KZD7_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDB78855.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
glycoside hydrolase clan GH-D
L3_069_242G1_scaffold_169_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20162..21121
DNA (960bp) protein (320aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU05_9FIRM
Glucokinase {ECO:0000313|EMBL:CCZ79189.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_069_242G1_scaffold_169_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21137..21541
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79190.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_169_20
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21705..23234
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00036FD1D1
Uncharacterized protein {ECO:0000313|EMBL:EEG89908.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
transposase IS4 family protein
L3_069_242G1_scaffold_169_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23987..24259
DNA (273bp) protein (91aa)
Anti-sigma-28 factor FlgM n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6V2_9FIRM
Anti-sigma-28 factor FlgM {ECO:0000313|EMBL:CCZ79191.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Anti-sigma-28 factor, FlgM.
L3_069_242G1_scaffold_169_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24290..24802
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79192.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_069_242G1_scaffold_169_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24817..26526
DNA (1710bp) protein (570aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULK8_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ79193.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein FlgK
L3_069_242G1_scaffold_169_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26545..28416
DNA (1872bp) protein (624aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU10_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CCZ79194.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein FlgK
L3_069_242G1_scaffold_169_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28472..30058
DNA (1587bp) protein (529aa)
Flagellar hook-associated protein 3 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA4_9FIRM
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:CCZ79195.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar hook-associated protein 3
L3_069_242G1_scaffold_169_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30084..30548
DNA (465bp) protein (155aa)
Flagellar assembly factor FliW n=1 Tax=Roseburia sp. CAG:18 RepID=R5V6V7_9FIRM
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar assembly factor fliW
L3_069_242G1_scaffold_169_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30552..30770
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=1 Tax=Roseburia sp. CAG:18 RepID=R5VEN2_9FIRM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
carbon storage regulator (csrA)
L3_069_242G1_scaffold_169_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30903..31316
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79198.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized flagellar protein FlaG
L3_069_242G1_scaffold_169_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31335..32888
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UU15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79199.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fliD1; flagellar hook-associated protein FliD1
L3_069_242G1_scaffold_169_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32953..33360
DNA (408bp) protein (136aa)
Flagellar protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMA7_9FIRM
Flagellar protein {ECO:0000313|EMBL:CCZ79200.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
flagellar protein
Displaying items 1-30 of 78 in total

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