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L3_069_242G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_244_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..553)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VLC7_9CLOT
two-component response regulator
Uncharacterized protein {ECO:0000313|EMBL:ENZ07179.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_069_242G1_scaffold_244_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(546..734)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99971.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_069_242G1_scaffold_244_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

999..1253
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03175.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_069_242G1_scaffold_244_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1257..2909
DNA (1653bp) protein (551aa)
TnpX site-specific recombinase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP69_9FIRM
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:EHM52861.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_069_242G1_scaffold_244_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3037..3729)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2PU73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK58945.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_069_242G1_scaffold_244_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3870..5048
DNA (1179bp) protein (393aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative glycoside hydrolase (EC:3.2.1.-)
Glycosyl hydrolase family 3 protein n=2 Tax=Oscillibacter RepID=U2QD19_9FIRM
L3_069_242G1_scaffold_244_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5092..6264
DNA (1173bp) protein (391aa)
Threonine/alanine tRNA ligase second additional domain protein (Fragment) n=1 Tax=Oscillibacter sp. KLE 1745 RepID=U2Q8C7_9FIRM
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:ERK59020.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_242G1_scaffold_244_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6249..6554
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QS42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59019.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_069_242G1_scaffold_244_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6554..7132
DNA (579bp) protein (193aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
Peptide methionine sulfoxide reductase MsrA n=2 Tax=Oscillibacter RepID=U2RTZ7_9FIRM
L3_069_242G1_scaffold_244_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7232..9184)
DNA (1953bp) protein (651aa)
Arylsulfatase (Fragment) n=1 Tax=Oscillibacter sp. KLE 1745 RepID=U2S898_9FIRM
Arylsulfatase {ECO:0000313|EMBL:ERK59017.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative esterase
L3_069_242G1_scaffold_244_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9251..9457)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QCP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59067.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_069_242G1_scaffold_244_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9457..10872)
DNA (1416bp) protein (472aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=2 Tax=Oscillibacter RepID=U2PUL8_9FIRM
L3_069_242G1_scaffold_244_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11292..12116)
DNA (825bp) protein (275aa)
R3H domain protein n=2 Tax=Oscillibacter RepID=U2QS81_9FIRM
R3H domain protein {ECO:0000313|EMBL:ERK59064.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Jag protein homolog
L3_069_242G1_scaffold_244_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12132..13262)
DNA (1131bp) protein (377aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Oscillibacter RepID=U2RU54_9FIRM
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:ERK59063.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_242G1_scaffold_244_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13414..13626)
DNA (213bp) protein (71aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Oscillibacter RepID=U2QCP4_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_242G1_scaffold_244_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13623..13967)
DNA (345bp) protein (115aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rnpA; ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=2 Tax=Oscillibacter RepID=U2PUL3_9FIRM
L3_069_242G1_scaffold_244_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14089..14229)
DNA (141bp) protein (47aa)
50S ribosomal protein L34 n=3 Tax=Oscillibacter RepID=R6TWS9_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpmH; 50S ribosomal protein L34
L3_069_242G1_scaffold_244_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14606..15922
DNA (1317bp) protein (439aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Oscillibacter RepID=U2RU50_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dnaA; chromosomal replication initiator protein DnaA
L3_069_242G1_scaffold_244_19
unknown

Not on your lists

comp(15980..16177)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_069_242G1_scaffold_244_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16180..17292
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
dnaN; DNA polymerase III beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Oscillibacter RepID=U2PUK9_9FIRM
L3_069_242G1_scaffold_244_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17297..17515
DNA (219bp) protein (73aa)
S4 domain protein n=2 Tax=Oscillibacter RepID=U2QDD8_9FIRM
S4 domain protein {ECO:0000313|EMBL:ERK59054.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_242G1_scaffold_244_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17502..18605
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=2 Tax=Oscillibacter RepID=U2RKV3_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
recF; DNA replication and repair protein RecF
L3_069_242G1_scaffold_244_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18720..19580
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2RU45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59052.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_069_242G1_scaffold_244_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19584..19847
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QCN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59051.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_242G1_scaffold_244_25
unknown

Not on your lists

19844..20020
DNA (177bp) protein (59aa)

This feature has no annotations

L3_069_242G1_scaffold_244_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20244..22193
DNA (1950bp) protein (650aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Oscillibacter RepID=U2PUK5_9FIRM
L3_069_242G1_scaffold_244_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22288..24774
DNA (2487bp) protein (829aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=2 Tax=Oscillibacter RepID=U2RKV0_9FIRM
L3_069_242G1_scaffold_244_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24892..25329
DNA (438bp) protein (146aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rnhA; ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=2 Tax=Oscillibacter RepID=U2RU40_9FIRM
L3_069_242G1_scaffold_244_29
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25793..26884)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7APE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD62678.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
hypothetical protein
L3_069_242G1_scaffold_244_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27146..29083
DNA (1938bp) protein (646aa)
putative NAD(+) synthetase (EC:6.3.5.-)
NAD+ synthase n=2 Tax=Oscillibacter RepID=U2QDI3_9FIRM
NAD+ synthase {ECO:0000313|EMBL:ERK59142.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Displaying items 1-30 of 65 in total

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