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L3_069_242G1_scaffold_357

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_357_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

285..740
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZCQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13424.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_069_242G1_scaffold_357_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

955..2085
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZYD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08433.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
ABC transporter ATP-binding protein
L3_069_242G1_scaffold_357_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2507..2827
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AAU2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88199.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_357_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2921..3229
DNA (309bp) protein (103aa)
IS66 family element, Orf2 protein n=2 Tax=Parabacteroides merdae RepID=A7AAU3_9PORP
IS66 family element, Orf2 protein {ECO:0000313|EMBL:EDN88200.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_069_242G1_scaffold_357_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3359..3784)
DNA (426bp) protein (142aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAU5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14896.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyl transferase family protein
L3_069_242G1_scaffold_357_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4531..4821
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6C4U3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14897.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_242G1_scaffold_357_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4939..5241)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WU82_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14898.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_357_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5867..7990)
DNA (2124bp) protein (708aa)
Tetratricopeptide repeat protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X020_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD14900.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_357_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8128..8460)
DNA (333bp) protein (111aa)
Biotin-requiring enzyme n=7 Tax=Parabacteroides RepID=A7AAV1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14901.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
pyruvate/oxaloacetate carboxyltransferase
L3_069_242G1_scaffold_357_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8485..9861)
DNA (1377bp) protein (459aa)
Carboxyl transferase domain protein n=3 Tax=Parabacteroides RepID=A7AAV2_9PORP
Carboxyl transferase domain protein {ECO:0000313|EMBL:EDN88209.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetyl-CoA carboxylase, carboxyltransferase component
L3_069_242G1_scaffold_357_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9858..9953)
DNA (96bp) protein (32aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YBA2_9PORP
Carboxyl transferase domain protein {ECO:0000313|EMBL:EDN88209.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
acetyl-CoA carboxylase, carboxyltransferase component
L3_069_242G1_scaffold_357_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9978..10535)
DNA (558bp) protein (186aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=3 Tax=Parabacteroides RepID=B7B7H4_9PORP
L3_069_242G1_scaffold_357_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10541..10981)
DNA (441bp) protein (147aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Putative Holliday junction resolvase n=3 Tax=Parabacteroides RepID=K5Z9P1_9PORP
Holliday junction resolvase-like protein
L3_069_242G1_scaffold_357_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11032..12429)
DNA (1398bp) protein (466aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X025_9PORP
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDD14905.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycosyltransferase
L3_069_242G1_scaffold_357_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12526..13674)
DNA (1149bp) protein (383aa)
OmpA family protein n=3 Tax=Parabacteroides RepID=A7AAV6_9PORP
OmpA family protein {ECO:0000313|EMBL:EDN88213.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein OmpA
L3_069_242G1_scaffold_357_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13785..14936)
DNA (1152bp) protein (384aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
GDP-mannose 4,6-dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y924_9PORP
GDP-D-mannose dehydratase
L3_069_242G1_scaffold_357_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14995..16065)
DNA (1071bp) protein (357aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
GDP-L-fucose synthase n=3 Tax=Parabacteroides RepID=A7AAV8_9PORP
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
L3_069_242G1_scaffold_357_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16058..16942)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Parabacteroides RepID=A7AAV9_9PORP
glucose-1-phosphate thymidylyltransferase
L3_069_242G1_scaffold_357_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17035..17157
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6BI17_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14910.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_069_242G1_scaffold_357_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17141..17719
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AAW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14911.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_357_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17957..18964)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y930_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14912.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_069_242G1_scaffold_357_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18982..21684)
DNA (2703bp) protein (901aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZA99_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08115.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
TonB-dependent receptor plug
L3_069_242G1_scaffold_357_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21688..22569)
DNA (882bp) protein (294aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Parabacteroides merdae RepID=A7AAW4_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDN88221.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anti-FecI sigma factor, FecR
L3_069_242G1_scaffold_357_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23247..24440
DNA (1194bp) protein (398aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3W3_9PORP
L3_069_242G1_scaffold_357_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24502..25905
DNA (1404bp) protein (468aa)
Chorismate binding enzyme n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WR60_9PORP
Chorismate binding enzyme {ECO:0000313|EMBL:CDD13828.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
anthranilate synthase component I
L3_069_242G1_scaffold_357_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25935..26504
DNA (570bp) protein (190aa)
Glutamine amidotransferase, class I n=3 Tax=Parabacteroides RepID=A7AAW7_9PORP
Glutamine amidotransferase, class I {ECO:0000313|EMBL:EDN88224.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
anthranilate synthase component II
L3_069_242G1_scaffold_357_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26528..27532
DNA (1005bp) protein (335aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XBS2_9PORP
anthranilate phosphoribosyltransferase
L3_069_242G1_scaffold_357_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27543..28352
DNA (810bp) protein (270aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Indole-3-glycerol phosphate synthase n=3 Tax=Parabacteroides RepID=A7AAW9_9PORP
trpC; indole-3-glycerol-phosphate synthase
L3_069_242G1_scaffold_357_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28349..29014
DNA (666bp) protein (222aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=3 Tax=Parabacteroides RepID=A7AAX0_9PORP
N-(5'-phosphoribosyl) anthranilate isomerase
L3_069_242G1_scaffold_357_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29037..29807
DNA (771bp) protein (257aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WR54_9PORP
Displaying items 1-30 of 54 in total

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