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L3_069_242G1_scaffold_144

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_144_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(225..536)
DNA (312bp) protein (104aa)
Peptidase M56 family n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5S5_9CLOT
Peptidase M56 family {ECO:0000313|EMBL:CCX49524.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_069_242G1_scaffold_144_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1011..1538
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45817.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_144_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1727..2245
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0P3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38510.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Hypothetical protein
L3_069_242G1_scaffold_144_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2463..2975
DNA (513bp) protein (171aa)
3H domain protein n=2 Tax=Oscillibacter RepID=U2RBD4_9FIRM
3H domain protein {ECO:0000313|EMBL:ERK65854.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_069_242G1_scaffold_144_5
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

3161..4237
DNA (1077bp) protein (359aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH32_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB86803.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L3_069_242G1_scaffold_144_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4381..5253
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46241.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
membrane protein
L3_069_242G1_scaffold_144_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5320..5850)
DNA (531bp) protein (177aa)
Heptaprenyl diphosphate synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF0_9FIRM
Heptaprenyl diphosphate synthase {ECO:0000313|EMBL:EGJ46450.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
heptaprenyl diphosphate synthase component I
L3_069_242G1_scaffold_144_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5819..6199)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46449.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_144_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6196..7245)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46448.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ApbE family lipoprotein
L3_069_242G1_scaffold_144_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7259..7501)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34872.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_069_242G1_scaffold_144_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7589..7864)
DNA (276bp) protein (92aa)
Integration host factor, beta subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE6_9FIRM
Integration host factor, beta subunit {ECO:0000313|EMBL:EGJ46446.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
nucleoid protein Hbs
L3_069_242G1_scaffold_144_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7950..8744)
DNA (795bp) protein (265aa)
Tetrapyrrole methylase/MazG family protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE5_9FIRM
Tetrapyrrole methylase/MazG family protein {ECO:0000313|EMBL:EGJ46445.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_144_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8783..10648)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46444.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative transporter
L3_069_242G1_scaffold_144_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10686..12008)
DNA (1323bp) protein (441aa)
mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD (EC:3.5.4.28 3.5.4.31)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46443.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_144_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12016..12840)
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Purine nucleoside phosphorylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE2_9FIRM
purine nucleoside phosphorylase I
L3_069_242G1_scaffold_144_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12854..13246)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46441.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_144_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13507..14091
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35784.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
XRE family transcriptional regulator
L3_069_242G1_scaffold_144_18
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14271..14690
DNA (420bp) protein (140aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GRK2_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGR77129.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
Putative translation initiation inhibitor, yjgF family
L3_069_242G1_scaffold_144_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14723..15421
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46809.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_144_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15649..17037
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM45622.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_069_242G1_scaffold_144_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17296..17913
DNA (618bp) protein (206aa)
HTH-type transcriptional regulator MtrR n=4 Tax=Lachnospiraceae RepID=A5KJ85_9FIRM
HTH-type transcriptional regulator MtrR {ECO:0000313|EMBL:EDK25388.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
putative TetR family transcriptional regulator
L3_069_242G1_scaffold_144_22
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17939..19000
DNA (1062bp) protein (354aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative ribosome biogenesis GTPase RsgA;putative EngC-like GTPase (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=4 Tax=Lachnospiraceae RepID=A5KJ86_9FIRM
L3_069_242G1_scaffold_144_23
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

19018..19665
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RQN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC47644.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
acetyltransferase
L3_069_242G1_scaffold_144_24
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19834..20700)
DNA (867bp) protein (289aa)
Putative formate transporter n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KZJ4_OSCVS
putative formate transporter
Putative formate transporter {ECO:0000313|EMBL:BAK98827.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_069_242G1_scaffold_144_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20739..22007)
DNA (1269bp) protein (423aa)
folC; folylpolyglutamate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46500.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_144_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21985..22914)
DNA (930bp) protein (310aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FDL0_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_069_242G1_scaffold_144_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22947..23546)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46501.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_144_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23563..24114)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46502.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_144_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24275..24910)
DNA (636bp) protein (212aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Formiminotetrahydrofolate cyclodeaminase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK3_9FIRM
Formiminotetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EGJ46503.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_144_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24945..25859)
DNA (915bp) protein (305aa)
Glutamate formiminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK4_9FIRM
Glutamate formiminotransferase {ECO:0000313|EMBL:EGJ46504.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative glutamate formimidoyltransferase
Displaying items 1-30 of 72 in total

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