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L3_069_242G1_scaffold_421

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_421_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..825)
DNA (825bp) protein (275aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDM7_9FIRM
putative methyltransferase
L3_069_242G1_scaffold_421_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(864..1523)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46922.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted O-methyltransferase
L3_069_242G1_scaffold_421_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1520..2143)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46921.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L3_069_242G1_scaffold_421_4
unknown

Not on your lists

comp(2146..2478)
DNA (333bp) protein (111aa)

This feature has no annotations

L3_069_242G1_scaffold_421_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2600..4348)
DNA (1749bp) protein (583aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDM3_9FIRM
L3_069_242G1_scaffold_421_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4520..4957)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46918.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_421_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5213..5629
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47068.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_421_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5745..7577)
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46950.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative esterase
L3_069_242G1_scaffold_421_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7756..8871)
DNA (1116bp) protein (372aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ3_9FIRM
L3_069_242G1_scaffold_421_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9142..10005
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46948.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_421_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

10114..10848
DNA (735bp) protein (245aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3B3_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCX73279.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Amino acid ABC transporter, amino acid-binding/permease protein
L3_069_242G1_scaffold_421_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

10832..11578
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZ52_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA81728.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ABC transporter
L3_069_242G1_scaffold_421_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11705..12337)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RUS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60307.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_421_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12484..13020)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46945.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rbr1; rubrerythrin
L3_069_242G1_scaffold_421_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13247..13936)
DNA (690bp) protein (230aa)
ntpD; V-type Na(+)-transporting ATPase D subunit (EC:3.6.3.15)
V-type ATP synthase subunit D n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T5_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_421_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13990..15369)
DNA (1380bp) protein (460aa)
ntpB; V-type Na(+)-transporting ATPase B subunit (EC:3.6.3.15)
V-type ATP synthase beta chain n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T4_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_421_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15366..17141)
DNA (1776bp) protein (592aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ntpA; V-type Na(+)-transporting ATPase A subunit (EC:3.6.3.15)
V-type ATP synthase alpha chain n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T3_9FIRM
L3_069_242G1_scaffold_421_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17171..17479)
DNA (309bp) protein (103aa)
ntpG; V-type Na(+)-transporting ATPase G subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit F n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T2_9FIRM
V-type H+-transporting ATPase subunit F {ECO:0000313|EMBL:EGJ47110.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_421_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17495..18496)
DNA (1002bp) protein (334aa)
ntpC; V-type Na(+)-transporting ATPase C subunit (EC:3.6.3.15)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47109.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_421_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18627..19316)
DNA (690bp) protein (230aa)
V-type proton ATPase subunit E n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9T0_9FIRM
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
H+transporting two-sector ATPase E subunit
L3_069_242G1_scaffold_421_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19330..19863)
DNA (534bp) protein (178aa)
ntpK; V-type Na(+)-transporting ATPase K subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit K n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S9_9FIRM
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:EGJ47107.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_421_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19879..21849)
DNA (1971bp) protein (657aa)
ntpI; V-type Na(+)-transporting ATPase I subunit (EC:3.6.3.15)
V-type H+-transporting ATPase subunit I n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S8_9FIRM
V-type H+-transporting ATPase subunit I {ECO:0000313|EMBL:EGJ47106.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_421_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21849..22163)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47105.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_421_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22607..23020
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46716.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein, possibly involved in aromatic compounds catabolism
L3_069_242G1_scaffold_421_25
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23117..23737)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13712.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_069_242G1_scaffold_421_26
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23756..24649)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YBG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13713.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative deoxyribonuclease
L3_069_242G1_scaffold_421_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24646..25152)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47261.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_421_28
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25386..25997)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N1ZYL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30903.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_069_242G1_scaffold_421_29
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25994..26551)
DNA (558bp) protein (186aa)
Sigma-70 region 2 n=1 Tax=Clostridium sp. CAG:510 RepID=R6CQM1_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:CDA67512.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L3_069_242G1_scaffold_421_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(26754..27389)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14171.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Displaying items 1-30 of 47 in total

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