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L3_069_242G1_scaffold_577

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_577_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..565
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5I925_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61564.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Predicted membrane protein
L3_069_242G1_scaffold_577_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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625..1392
DNA (768bp) protein (256aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P068_9FIRM
L3_069_242G1_scaffold_577_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1717..3234
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46913.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative iron hydrogenase
L3_069_242G1_scaffold_577_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3656..7501
DNA (3846bp) protein (1282aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDV3_9FIRM
L3_069_242G1_scaffold_577_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7523..11215
DNA (3693bp) protein (1231aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDV4_9FIRM
L3_069_242G1_scaffold_577_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11690..12232)
DNA (543bp) protein (181aa)
Rubredoxin n=3 Tax=Clostridiales RepID=G9YUI4_9FIRM
Rubredoxin {ECO:0000313|EMBL:EHM42247.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Rubrerythrin
L3_069_242G1_scaffold_577_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12229..12648)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46824.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Fur family ferric uptake regulator
L3_069_242G1_scaffold_577_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12816..13505)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46825.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_577_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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13742..15889
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZI27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14085.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative transcription accessory protein
L3_069_242G1_scaffold_577_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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15967..18462
DNA (2496bp) protein (832aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
DNA helicase II/ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAW8_9FIRM
L3_069_242G1_scaffold_577_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(18511..18705)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YFX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14071.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L3_069_242G1_scaffold_577_12
unknown

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18818..18982
DNA (165bp) protein (55aa)

This feature has no annotations

L3_069_242G1_scaffold_577_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19101..19571)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46801.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_577_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19792..21168)
DNA (1377bp) protein (459aa)
Uracil permease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA6_9FIRM
Uracil permease {ECO:0000313|EMBL:EGJ46802.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
uracil-xanthine permease
L3_069_242G1_scaffold_577_15
unknown

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comp(21186..21302)
DNA (117bp) protein (39aa)

This feature has no annotations

L3_069_242G1_scaffold_577_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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21538..22797
DNA (1260bp) protein (420aa)
lysA; putative diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA7_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:EGJ46803.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_577_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23288..23659
DNA (372bp) protein (124aa)
Holin-like protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA8_9FIRM
Holin-like protein {ECO:0000313|EMBL:EGJ46804.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_577_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23652..24341
DNA (690bp) protein (230aa)
TIGR00659 family protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA9_9FIRM
TIGR00659 family protein {ECO:0000313|EMBL:EGJ46805.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
LrgB family protein
L3_069_242G1_scaffold_577_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24405..26312)
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6A0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63387.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative surface layer protein
L3_069_242G1_scaffold_577_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26747..27094)
DNA (348bp) protein (116aa)
Nucleoid-associated protein HMPREF0866_02327 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFF2_9FIRM
Nucleoid-associated protein HMPREF0866_02327 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_069_242G1_scaffold_577_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27125..28837)
DNA (1713bp) protein (571aa)
dnaX; DNA polymerase III gamma/tau subunit (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFF3_9FIRM
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EGJ46173.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_577_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29567..30745
DNA (1179bp) protein (393aa)
putative RNA helicase (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46421.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_069_242G1_scaffold_577_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

30742..31344
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XXI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14389.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L3_069_242G1_scaffold_577_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

31452..31667
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14391.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
phage shock protein PspC
L3_069_242G1_scaffold_577_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31768..32625
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46423.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
acetyltransferase
Displaying 25 items

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