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L3_069_242G1_scaffold_2122

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_2122_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(14..931)
DNA (918bp) protein (306aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
pseudouridine synthase (EC:5.4.99.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF72_9FIRM
L3_069_242G1_scaffold_2122_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(928..1407)
DNA (480bp) protein (160aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV2_9FIRM
L3_069_242G1_scaffold_2122_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1563..2252
DNA (690bp) protein (230aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV3_9FIRM
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EGJ45814.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_069_242G1_scaffold_2122_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2260..3300)
DNA (1041bp) protein (347aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJU3_9FIRM
histidine kinase
L3_069_242G1_scaffold_2122_5
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3297..3968)
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJU4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EET59022.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
heme response regulator HssR
L3_069_242G1_scaffold_2122_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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4372..5607
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S601_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46269.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_069_242G1_scaffold_2122_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5631..6872
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AAY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD57978.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
RND family efflux transporter, MFP subunit
L3_069_242G1_scaffold_2122_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6876..9938
DNA (3063bp) protein (1021aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WB24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01396.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Cation/multidrug efflux pump
L3_069_242G1_scaffold_2122_9
unknown

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10195..10434
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying 9 items

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