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L3_069_242G1_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_57_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..124
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RMS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC50218.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_069_242G1_scaffold_57_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

590..1690
DNA (1101bp) protein (367aa)
isomerase (EC:5.5.1.-)
Isomerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0D8_9CLOT
Isomerase {ECO:0000313|EMBL:CDD41798.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_242G1_scaffold_57_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1703..3010
DNA (1308bp) protein (436aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AGR0_9CLOT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDD41802.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
citrate transporter
L3_069_242G1_scaffold_57_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3042..3836
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z6E6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD41805.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3973..4308
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD41808.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4644..5210
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z6I1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD41835.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5361..5927)
DNA (567bp) protein (189aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A5L3_9CLOT
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDD38012.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
PTS operon transcription antiterminator
L3_069_242G1_scaffold_57_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6330..7487)
DNA (1158bp) protein (386aa)
Sigma-54 interaction domain-containing protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YPZ3_9CLOT
Sigma-54 interaction domain-containing protein {ECO:0000313|EMBL:CDD38013.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
sigma-54 factor interaction domain-containing protein
L3_069_242G1_scaffold_57_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7591..8292)
DNA (702bp) protein (234aa)
Aldo/keto reductase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH84_9CLOT
Aldo/keto reductase {ECO:0000313|EMBL:CDD45460.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
oxidoreductase, aryl-alcohol dehydrogenase like protein
L3_069_242G1_scaffold_57_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8331..8903)
DNA (573bp) protein (191aa)
Fructose-bisphosphate aldolase class-II protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQ12_9CLOT
Fructose-bisphosphate aldolase class-II protein {ECO:0000313|EMBL:CDD45459.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ketose-bisphosphate aldolase
L3_069_242G1_scaffold_57_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8968..9804)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45458.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9788..10543)
DNA (756bp) protein (252aa)
Phosphotransferase system PTS sorbose-specific IIC subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZWL8_9CLOT
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:CDD45456.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
PTS sorbose-specific transporter subunit IIC
L3_069_242G1_scaffold_57_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10562..11038)
DNA (477bp) protein (159aa)
PTS system sorbose subfamily IIB component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH80_9CLOT
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:CDD45455.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
PTS sugar transporter
L3_069_242G1_scaffold_57_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11057..11806)
DNA (750bp) protein (250aa)
Alcohol dehydrogenase GroES domain-containing protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZWL4_9CLOT
Alcohol dehydrogenase GroES domain-containing protein {ECO:0000313|EMBL:CDD45451.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Zn-dependent alcohol dehydrogenase
L3_069_242G1_scaffold_57_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12231..12473
DNA (243bp) protein (81aa)
Thioredoxin n=1 Tax=Clostridium sp. CAG:299 RepID=R7AS32_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
thioredoxin
L3_069_242G1_scaffold_57_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12575..13411)
DNA (837bp) protein (279aa)
diguanylate kinase signaling protein (EC:2.7.7.65)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45445.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_242G1_scaffold_57_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13508..13744)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45444.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
signaling protein
L3_069_242G1_scaffold_57_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14078..16126
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45443.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
signaling protein
L3_069_242G1_scaffold_57_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16138..16665)
DNA (528bp) protein (176aa)
Bacterial inner membrane protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH65_9CLOT
Bacterial inner membrane protein {ECO:0000313|EMBL:CDD45440.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Bacterial inner membrane protein.
L3_069_242G1_scaffold_57_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16897..17835
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45438.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
dTDP-glucose pyrophosphorylase
L3_069_242G1_scaffold_57_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17896..18552
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZWJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45436.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18639..21161
DNA (2523bp) protein (841aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45434.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21337..22629
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R7AS18_9CLOT
L3_069_242G1_scaffold_57_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23045..24235
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH52_9CLOT
L3_069_242G1_scaffold_57_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24546..24971
DNA (426bp) protein (142aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPX7_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD45429.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
AraC-type DNA-binding domain-containing proteins
L3_069_242G1_scaffold_57_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25130..26620
DNA (1491bp) protein (497aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase./HAMP domain n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZAK0_9CLOT
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_069_242G1_scaffold_57_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26617..27306
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:299 RepID=R7AS12_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDD45427.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_069_242G1_scaffold_57_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27360..29057
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZWI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45426.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_57_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29054..30361
DNA (1308bp) protein (436aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZH48_9CLOT
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:CDD45425.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
branched-chain amino acid uptake carrier
L3_069_242G1_scaffold_57_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30625..32286
DNA (1662bp) protein (554aa)
Superfamily II DNA and RNA helicases n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZPW9_9CLOT
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:CDD45424.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Superfamily II DNA and RNA helicases
Displaying items 1-30 of 126 in total

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