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L3_069_242G1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_247_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(166..1032)
DNA (867bp) protein (289aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRS5_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
tyrosine recombinase XerD subunit
L3_069_242G1_scaffold_247_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1234..1794)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z550_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38689.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_247_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1861..2454)
DNA (594bp) protein (198aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXQ0_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD38690.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
NUDIX hydrolase
L3_069_242G1_scaffold_247_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2495..3292)
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCP6_9CLOT
L3_069_242G1_scaffold_247_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3501..5048)
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Ribonuclease Y n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7H7_9CLOT
metal dependent phosphohydrolase
L3_069_242G1_scaffold_247_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5161..5766)
DNA (606bp) protein (202aa)
Regulatory protein RecX n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRS8_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_247_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5769..6842)
DNA (1074bp) protein (358aa)
Protein RecA n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z553_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
protein RecA
L3_069_242G1_scaffold_247_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7291..8637
DNA (1347bp) protein (449aa)
Potassium uptake protein TrkH family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXQ5_9CLOT
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CDD38695.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
potassium uptake protein, TrkH family
L3_069_242G1_scaffold_247_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8665..9318
DNA (654bp) protein (218aa)
K+ transport systems NAD-binding component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCQ1_9CLOT
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CDD38696.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
K+ transport systems, NAD-binding component
L3_069_242G1_scaffold_247_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9427..10245)
DNA (819bp) protein (273aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7I1_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD38697.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
beta-lactamase
L3_069_242G1_scaffold_247_11
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10260..11150)
DNA (891bp) protein (297aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EFE11171.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFE11171.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Peptidase, S8/S53 family n=1 Tax=Clostridium sp. M62/1 RepID=D4CGS0_9CLOT
Subtilisin-like serine proteases
L3_069_242G1_scaffold_247_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11405..11860
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38700.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protein of unknown function (DUF2726).
L3_069_242G1_scaffold_247_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11901..12911)
DNA (1011bp) protein (337aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCQ5_9CLOT
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDD38701.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted xylanase/chitin deacetylase
L3_069_242G1_scaffold_247_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13144..13941
DNA (798bp) protein (266aa)
Predicted DNA-binding proteins n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRU0_9CLOT
UPF0251 protein BN593_01066 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted DNA-binding proteins
L3_069_242G1_scaffold_247_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14209..15516
DNA (1308bp) protein (436aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Glutamine phosphoribosylpyrophosphate amidotransferase (EC:2.4.2.14)
Putative amidophosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7J0_9CLOT
L3_069_242G1_scaffold_247_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15572..15913)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z565_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38709.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_247_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16226..17113
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38711.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_247_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17143..18051
DNA (909bp) protein (303aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z569_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDD38714.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transcriptional regulator
L3_069_242G1_scaffold_247_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18154..19746)
DNA (1593bp) protein (531aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCR7_9CLOT
L3_069_242G1_scaffold_247_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19976..21094)
DNA (1119bp) protein (373aa)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRV5_9CLOT
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDD38718.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cellulase M and related proteins
L3_069_242G1_scaffold_247_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21141..21941)
DNA (801bp) protein (267aa)
D-aminopeptidase (EC:3.4.11.-)
D-aminopeptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXS7_9CLOT
D-aminopeptidase {ECO:0000313|EMBL:CDD38720.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_242G1_scaffold_247_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21977..22966)
DNA (990bp) protein (330aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCS2_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD38721.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L3_069_242G1_scaffold_247_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22979..23956)
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein C-terminal domain n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRW1_9CLOT
Oligopeptide/dipeptide ABC transporter ATP-binding protein C-terminal domain {ECO:0000313|EMBL:CDD38723.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L3_069_242G1_scaffold_247_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23985..24863)
DNA (879bp) protein (293aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXT0_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CDD38725.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_069_242G1_scaffold_247_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24882..25802)
DNA (921bp) protein (307aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7K6_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CDD38727.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_069_242G1_scaffold_247_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25912..27633)
DNA (1722bp) protein (574aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRW6_9CLOT
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDD38728.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type dipeptide transport system, periplasmic component
L3_069_242G1_scaffold_247_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27830..29596)
DNA (1767bp) protein (589aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z582_9CLOT
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDD38729.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ABC-type dipeptide transport system, periplasmic component
L3_069_242G1_scaffold_247_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29853..30581
DNA (729bp) protein (243aa)
Predicted glutamine amidotransferases n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXT3_9CLOT
Predicted glutamine amidotransferases {ECO:0000313|EMBL:CDD38730.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted glutamine amidotransferases
L3_069_242G1_scaffold_247_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30691..31794)
DNA (1104bp) protein (368aa)
L-aminopeptidase/D-esterase (EC:3.4.11.19)
Peptidase family T4 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCT1_9CLOT
Peptidase family T4 {ECO:0000313|EMBL:CDD38731.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_242G1_scaffold_247_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31929..32534
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7L0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38732.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
Displaying items 1-30 of 76 in total

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