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L3_069_242G1_scaffold_977

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_069_242G1_scaffold_977_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(572..1720)
DNA (1149bp) protein (383aa)
Integrase family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1T2_CLOSW
Site-specific recombinase XerD {ECO:0000313|EMBL:EXG84506.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
integrase family protein
L3_069_242G1_scaffold_977_2
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1739..2899)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MMS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF01935.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
hypothetical protein
L3_069_242G1_scaffold_977_3
unknown

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comp(2871..3044)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_069_242G1_scaffold_977_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3332..3568)
DNA (237bp) protein (79aa)
XRE family transcriptional regulator n=2 Tax=Clostridium RepID=R0ABY3_9CLOT
XRE family transcriptional regulator {ECO:0000313|EMBL:ENZ49591.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_069_242G1_scaffold_977_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3668..4072
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D000_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55362.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_069_242G1_scaffold_977_6
unknown

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comp(4121..4552)
DNA (432bp) protein (144aa)

This feature has no annotations

L3_069_242G1_scaffold_977_7

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comp(4570..5346)
DNA (777bp) protein (259aa)
Uncharacterized protein n=13 Tax=Streptococcus agalactiae RepID=S8H8I9_STRAG
Uncultured bacterium plasmid pRGI00631 {ECO:0000313|EMBL:CDL66166.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mob protein
L3_069_242G1_scaffold_977_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5799..6518
DNA (720bp) protein (240aa)
Branched-chain amino acid transporter AzlC n=1 Tax=Dorea sp. 5-2 RepID=R9NF98_9FIRM
Branched-chain amino acid transporter AzlC {ECO:0000313|EMBL:EOS81616.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
branched-chain amino acid transport protein AzlC
L3_069_242G1_scaffold_977_9
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6563..6889
DNA (327bp) protein (109aa)
branched-chain amino acid transporter AzlD n=1 Tax=Blautia producta RepID=UPI000364AAD8
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:CDA05357.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
azlD; branched-chain amino acid transport protein
L3_069_242G1_scaffold_977_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6921..7697)
DNA (777bp) protein (259aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQS1_9CLOT
L3_069_242G1_scaffold_977_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7753..9090)
DNA (1338bp) protein (446aa)
Glycosyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBE4_9CLOT
Glycosyltransferase {ECO:0000313|EMBL:CDD45698.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Glycosyltransferase
L3_069_242G1_scaffold_977_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9546..12233
DNA (2688bp) protein (896aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
ATPase P-type (Transporting) HAD superfamily subfamily IC n=1 Tax=Clostridium sp. CAG:299 RepID=R7AUI6_9CLOT
ATPase P-type (Transporting) HAD superfamily subfamily IC {ECO:0000313|EMBL:CDD45697.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_242G1_scaffold_977_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12432..13799
DNA (1368bp) protein (456aa)
Amino acid permease n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZX89_9CLOT
Amino acid permease {ECO:0000313|EMBL:CDD45696.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
amino acid permease
L3_069_242G1_scaffold_977_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13928..16471)
DNA (2544bp) protein (848aa)
Rubredoxin n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHT0_9CLOT
Rubredoxin {ECO:0000313|EMBL:CDD45695.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized flavoproteins
L3_069_242G1_scaffold_977_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16760..17833
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45694.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
serine/threonine protein kinase
L3_069_242G1_scaffold_977_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17901..18464
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45693.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_977_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18465..18851
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AUI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45692.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_069_242G1_scaffold_977_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18884..19267
DNA (384bp) protein (128aa)
lactoylglutathione lyase (EC:4.4.1.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZX85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45691.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L3_069_242G1_scaffold_977_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19495..19944
DNA (450bp) protein (150aa)
Hsp20/alpha crystallin family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZF18_9CLOT
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDD44755.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Molecular chaperone (small heat shock protein)
Displaying 19 items

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