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L3_072_000G1_scaffold_1118

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_1118_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..1363
DNA (1362bp) protein (454aa)
30S ribosomal protein S1 n=2 Tax=Bacteroides caccae RepID=A5ZGD5_9BACE
30S ribosomal protein S1 {ECO:0000313|EMBL:EDM21245.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
rpsA; 30S ribosomal protein S1
L3_072_000G1_scaffold_1118_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1553..2491
DNA (939bp) protein (313aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S9_9BACE
L3_072_000G1_scaffold_1118_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2508..4025
DNA (1518bp) protein (506aa)
Conserved domain protein n=3 Tax=Bacteroides RepID=A5ZGD7_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM21247.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1118_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4053..4604
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=2 Tax=Bacteroides RepID=A5ZGD8_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CCZ72401.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase ECF-type sigma factor
L3_072_000G1_scaffold_1118_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4622..5032
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGD9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21249.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1118_6
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5060..5524
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V804_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72399.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_1118_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5634..6422)
DNA (789bp) protein (263aa)
MazG family protein (EC:3.6.1.19)
MazG family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U2S5_9BACE
MazG family protein {ECO:0000313|EMBL:CCZ72398.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000G1_scaffold_1118_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6495..7538)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21252.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1118_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7688..8002
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q161_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21254.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1118_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


8286..10922
DNA (2637bp) protein (879aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=root RepID=A5ZGE5_9BACE
L3_072_000G1_scaffold_1118_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11039..12934
DNA (1896bp) protein (632aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGE6_9BACE
two-component system sensor histidine kinase
L3_072_000G1_scaffold_1118_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12943..13518)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides RepID=A5ZGE7_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72392.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_072_000G1_scaffold_1118_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13654..14670
DNA (1017bp) protein (339aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides RepID=A5ZGE8_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EDM21258.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Fe2+-dicitrate sensor, membrane component
L3_072_000G1_scaffold_1118_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14922..18233
DNA (3312bp) protein (1104aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=A5ZGE9_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21259.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative outer membrane protein probably involved in nutrient binding
L3_072_000G1_scaffold_1118_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18240..19760
DNA (1521bp) protein (507aa)
SusD family protein n=3 Tax=Bacteroides RepID=A5ZGF0_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21260.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
frrH; putative outer membrane protein
L3_072_000G1_scaffold_1118_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19775..21085
DNA (1311bp) protein (437aa)
Fibrobacter succinogene major paralogous domain protein n=2 Tax=Bacteroides RepID=A5ZGF1_9BACE
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:CCZ72387.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000G1_scaffold_1118_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21114..21293
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0H6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21262.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000G1_scaffold_1118_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21319..22560
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21262.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1118_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22806..25133
DNA (2328bp) protein (776aa)
Glycosyl hydrolase family 35 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGF3_9BACE
Glycosyl hydrolase family 35 {ECO:0000313|EMBL:EDM21263.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
beta-galactosidase
L3_072_000G1_scaffold_1118_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25203..27326
DNA (2124bp) protein (708aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Bacteroides RepID=A5ZGF4_9BACE
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EDM21264.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
alpha-N-acetylglucosaminidase
L3_072_000G1_scaffold_1118_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27859..28914)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22584.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative endonuclease/exonuclease/phosphatase family protein
L3_072_000G1_scaffold_1118_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28926..30476)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V819_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22585.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_1118_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30490..33651)
DNA (3162bp) protein (1054aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q0I2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY22586.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative outer membrane protein probably involved in nutrient binding
L3_072_000G1_scaffold_1118_24
unknown

Not on your lists

33682..33777
DNA (96bp) protein (32aa)

This feature has no annotations

L3_072_000G1_scaffold_1118_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33944..35185)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VBB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22587.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
glycoside hydrolase family protein
L3_072_000G1_scaffold_1118_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35311..39348)
DNA (4038bp) protein (1346aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q179_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22588.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
two-component system sensor histidine kinase/response regulator
L3_072_000G1_scaffold_1118_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39359..39805)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGF6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72382.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_1118_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39867..40973)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZGF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72381.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_1118_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41190..44507)
DNA (3318bp) protein (1106aa)
Protein translocase subunit SecA n=2 Tax=Bacteroides RepID=I9Q0I6_9BACE
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
protein translocase subunit secA
L3_072_000G1_scaffold_1118_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44613..46187)
DNA (1575bp) protein (525aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZKW4_9BACE
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EDM19241.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Type I phosphodiesterase / nucleotide pyrophosphatase.
Displaying items 1-30 of 65 in total

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