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L3_072_000G1_scaffold_1172

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_1172_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(853..1323)
DNA (471bp) protein (157aa)
Uncharacterized protein n=16 Tax=Bacteroidales RepID=C3R361_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50866.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_072_000G1_scaffold_1172_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1793..1966
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C6Z2X6_9BACE
Histone H1-like Hc1 family protein {ECO:0000313|EMBL:EXY76397.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
histone H1
L3_072_000G1_scaffold_1172_3
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2096..3538)
DNA (1443bp) protein (481aa)
OmpA family protein n=9 Tax=Bacteroidales RepID=C3R358_9BACE
Putative outer membrane protein {ECO:0000313|EMBL:CDM07283.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
membrane protein
L3_072_000G1_scaffold_1172_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3592..5049)
DNA (1458bp) protein (486aa)
Plasmid recombination enzyme n=4 Tax=Bacteroides RepID=D4VIS0_9BACE
recombinase
Plasmid recombination enzyme family protein {ECO:0000313|EMBL:EXY85643.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_072_000G1_scaffold_1172_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5256..6116)
DNA (861bp) protein (287aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C3R356_9BACE
MarR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EGN10307.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_072_000G1_scaffold_1172_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6141..6698)
DNA (558bp) protein (186aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C3R355_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50861.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_072_000G1_scaffold_1172_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6695..7090)
DNA (396bp) protein (132aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=C3R354_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN10309.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_072_000G1_scaffold_1172_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7101..7547)
DNA (447bp) protein (149aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C3R353_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM07288.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
L3_072_000G1_scaffold_1172_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7565..8614)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X9D1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50858.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_072_000G1_scaffold_1172_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8850..9494
DNA (645bp) protein (215aa)
Resolvase, N-terminal domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X9D0_9PORP
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEU50857.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
serine recombinase
L3_072_000G1_scaffold_1172_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9584..9688
DNA (105bp) protein (35aa)
Uncharacterized protein n=15 Tax=Bacteroidales RepID=G1UMF3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN06075.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_072_000G1_scaffold_1172_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9864..10544)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X9C9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50856.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_072_000G1_scaffold_1172_13
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11016..11270)
DNA (255bp) protein (85aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=Q64S72_BACFR
conserved hypothetical protein related to phage
Uncharacterized protein {ECO:0000313|EMBL:KKB60276.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
L3_072_000G1_scaffold_1172_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11559..11744)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I0PYX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EPH19703.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_072_000G1_scaffold_1172_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11761..12261)
DNA (501bp) protein (167aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=C3R346_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYB10459.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_072_000G1_scaffold_1172_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12289..12603
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I0PYX2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY55694.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_072_000G1_scaffold_1172_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12680..12994)
DNA (315bp) protein (105aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C3R344_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF53814.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_072_000G1_scaffold_1172_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13460..13987)
DNA (528bp) protein (176aa)
Uncharacterized protein n=14 Tax=Bacteroidales RepID=C3R342_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN06080.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L3_072_000G1_scaffold_1172_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14475..14855)
DNA (381bp) protein (127aa)
Single-stranded DNA-binding protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X9C2_9PORP
Single-strand binding family protein {ECO:0000313|EMBL:EEU50849.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
single-stranded DNA-binding protein
L3_072_000G1_scaffold_1172_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15553..15813)
DNA (261bp) protein (87aa)
Uncharacterized protein n=16 Tax=Bacteroidales RepID=Q64S63_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE52507.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_072_000G1_scaffold_1172_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15828..16157)
DNA (330bp) protein (110aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=Q64S62_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79403.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_1172_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16185..16316)
DNA (132bp) protein (44aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=I0PYX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE52505.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_072_000G1_scaffold_1172_23
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16511..16642)
DNA (132bp) protein (44aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=D4WSU7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ27511.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L3_072_000G1_scaffold_1172_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17431..20166)
DNA (2736bp) protein (912aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCC9_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM22148.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
two-component system sensor histidine kinase/response regulator
L3_072_000G1_scaffold_1172_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20320..21504)
DNA (1185bp) protein (395aa)
ABC-2 type transporter n=3 Tax=Bacteroides RepID=A5ZCD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73271.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_072_000G1_scaffold_1172_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21488..22672)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V5G1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20487.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transmembrane protein
L3_072_000G1_scaffold_1172_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22680..23666)
DNA (987bp) protein (329aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCD2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22151.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1172_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23673..25085)
DNA (1413bp) protein (471aa)
Outer membrane efflux protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZCD3_9BACE
Outer membrane efflux protein {ECO:0000313|EMBL:EDM22152.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_072_000G1_scaffold_1172_29
unknown

Not on your lists

25125..25298
DNA (174bp) protein (58aa)

This feature has no annotations

L3_072_000G1_scaffold_1172_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


25582..27075
DNA (1494bp) protein (498aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=3 Tax=Bacteroides RepID=A5ZCD4_9BACE
Displaying items 1-30 of 83 in total

View Taxonomy