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L3_072_000G1_scaffold_1568

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_1568_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..544
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9QNB7_9BACE
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EXY87591.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
mobilization protein
L3_072_000G1_scaffold_1568_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

561..824
DNA (264bp) protein (88aa)
Uncharacterized protein n=15 Tax=root RepID=Q8A8P2_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77153.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_1568_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

808..1251
DNA (444bp) protein (148aa)
Uncharacterized protein n=15 Tax=root RepID=Q8A8P2_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY77153.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_1568_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1259..2185
DNA (927bp) protein (309aa)
integrase n=1 Tax=Bacteroides massiliensis RepID=UPI00036D96F1
integrase
Uncharacterized protein {ECO:0000313|EMBL:EDN84372.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000G1_scaffold_1568_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2254..3174)
DNA (921bp) protein (307aa)
Transcriptional regulator n=14 Tax=root RepID=Q8A8P4_BACTN
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04538.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_072_000G1_scaffold_1568_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3454..4608
DNA (1155bp) protein (385aa)
Uncharacterized protein n=14 Tax=Bacteroidales RepID=Q8A8P5_BACTN
6-phosphogluconolactonase
Uncharacterized protein {ECO:0000313|EMBL:KDS66530.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_072_000G1_scaffold_1568_7
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4633..6192
DNA (1560bp) protein (520aa)
Carboxymuconolactone decarboxylase family protein n=4 Tax=Bacteroidales RepID=A7ALX2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKU91720.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
carboxymuconolactone decarboxylase
L3_072_000G1_scaffold_1568_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7201..7350)
DNA (150bp) protein (50aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A7ALW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84365.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000G1_scaffold_1568_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7411..10107
DNA (2697bp) protein (899aa)
TonB-linked outer membrane protein, SusC/RagA family n=7 Tax=root RepID=A7ALW8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EPH18603.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
membrane protein
L3_072_000G1_scaffold_1568_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10120..11736
DNA (1617bp) protein (539aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L604_BACV8
SusD family protein {ECO:0000313|EMBL:EDY94949.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
membrane protein
L3_072_000G1_scaffold_1568_11
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11746..12348
DNA (603bp) protein (201aa)
Cyclic nucleotide-binding domain protein n=10 Tax=Bacteroidales RepID=A7ALW6_9PORP
Cyclic nucleotide-binding domain-containing protein {ECO:0000313|EMBL:EFV28196.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
cyclic nucleotide-binding protein
L3_072_000G1_scaffold_1568_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12691..13248
DNA (558bp) protein (186aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=Q8A8Q1_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN84360.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000G1_scaffold_1568_13
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13375..14547
DNA (1173bp) protein (391aa)
Tat pathway signal sequence domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2H0_BACPM
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:EFV28193.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
L3_072_000G1_scaffold_1568_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14555..15586
DNA (1032bp) protein (344aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A7ALW2_9PORP
alpha/beta hydrolase
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:EXY89039.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_072_000G1_scaffold_1568_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15629..16168
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZLP8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS04548.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
flavodoxin
L3_072_000G1_scaffold_1568_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16687..17112)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y6N5_BACSE
transposase
Uncharacterized protein {ECO:0000313|EMBL:EOS04549.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_072_000G1_scaffold_1568_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17137..17259)
DNA (123bp) protein (41aa)
Integrase n=12 Tax=Bacteroidales RepID=A7ALV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85970.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
integrase
L3_072_000G1_scaffold_1568_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18939..19367
DNA (429bp) protein (143aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Ferritin A n=15 Tax=Bacteroidales RepID=Q8A8Q8_BACTN
ferritin
L3_072_000G1_scaffold_1568_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19470..20117
DNA (648bp) protein (216aa)
Uncharacterized protein n=11 Tax=Bacteroidales RepID=Q8A8Q9_BACTN
antibiotic resistance protein MarC
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_072_000G1_scaffold_1568_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20168..20650
DNA (483bp) protein (161aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
Ferritin A n=15 Tax=Bacteroidales RepID=Q8A8R0_BACTN
ferritin
L3_072_000G1_scaffold_1568_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20679..21728
DNA (1050bp) protein (350aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase class I n=16 Tax=root RepID=Q8A8R1_BACTN
Uncharacterized protein {ECO:0000313|EMBL:EIY77180.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_1568_22
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21742..22491
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 n=15 Tax=Bacteroidales RepID=GPMA1_BACTN
gpmA; phosphoglyceromutase
L3_072_000G1_scaffold_1568_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22559..22987
DNA (429bp) protein (143aa)
Small heat shock protein n=16 Tax=root RepID=Q8A8R3_BACTN
heat-shock protein
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EDN84342.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_072_000G1_scaffold_1568_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23073..23528
DNA (456bp) protein (152aa)
RNA polymerase ECF-type sigma factor n=14 Tax=Bacteroidales RepID=Q8A8R4_BACTN
RNA polymerase sigma 70
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EIY77183.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L3_072_000G1_scaffold_1568_25
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23594..24577
DNA (984bp) protein (328aa)
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
6-phosphofructokinase 1 n=15 Tax=Bacteroidales PF1_BACTN">RepID=K6PF1_BACTN
L3_072_000G1_scaffold_1568_26
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24591..26837
DNA (2247bp) protein (749aa)
TrkA C-terminal domain protein n=5 Tax=root RepID=A7ALU3_9PORP
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:EFV28179.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
sodium:proton antiporter
L3_072_000G1_scaffold_1568_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26859..29417
DNA (2559bp) protein (853aa)
Alpha-glucan phosphorylase n=12 Tax=Bacteroidales RepID=A7ALU2_9PORP
Alpha-glucan phosphorylase {ECO:0000313|EMBL:EOS04560.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
alpha-glucan phosphorylase
L3_072_000G1_scaffold_1568_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29449..30243
DNA (795bp) protein (265aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=A7ALU1_9PORP
arginase
Uncharacterized protein {ECO:0000313|EMBL:EOS04561.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_072_000G1_scaffold_1568_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30298..30834
DNA (537bp) protein (179aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Methylglyoxal synthase n=16 Tax=root RepID=A6L618_BACV8
L3_072_000G1_scaffold_1568_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31552..31650
DNA (99bp) protein (33aa)
Uncharacterized protein n=10 Tax=Bacteroidales RepID=A7ALT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84332.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Displaying items 1-30 of 36 in total

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