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L3_072_000G1_scaffold_36

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Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_36_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

273..1355
DNA (1083bp) protein (361aa)
Putative membrane protein n=2 Tax=Collinsella RepID=R5ZI65_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36294.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_36_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1538..2461
DNA (924bp) protein (308aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9B9_9ACTN
PTS system fructose IIA component {ECO:0000313|EMBL:CDA36293.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_072_000G1_scaffold_36_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2498..3292
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Collinsella sp. CAG:166 RepID=R6A585_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDA36292.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_072_000G1_scaffold_36_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3306..4139
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPH9_9ACTN
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CDA36291.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PTS system IID component, Man family (TC 4.A.6)
L3_072_000G1_scaffold_36_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4339..5322
DNA (984bp) protein (328aa)
SIS domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBM0_9ACTN
SIS domain protein {ECO:0000313|EMBL:CDA36290.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Predicted phosphosugar isomerases
L3_072_000G1_scaffold_36_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5409..6038
DNA (630bp) protein (210aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI61_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA36289.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_072_000G1_scaffold_36_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6393..7400
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5Z9B5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36288.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_072_000G1_scaffold_36_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7620..8339
DNA (720bp) protein (240aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T8_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EBA39606.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Transcriptional regulators
L3_072_000G1_scaffold_36_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8708..10690
DNA (1983bp) protein (661aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecQ n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75662.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_072_000G1_scaffold_36_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10693..11448
DNA (756bp) protein (252aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T6_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EBA39604.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
GntR family transcriptional regulator
L3_072_000G1_scaffold_36_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11593..12561
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39603.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
sugar isomerase
L3_072_000G1_scaffold_36_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12694..13671)
DNA (978bp) protein (326aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Putative L-lactate dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T4_9ACTN
Putative L-lactate dehydrogenase {ECO:0000313|EMBL:EBA39602.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_072_000G1_scaffold_36_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13882..14808
DNA (927bp) protein (309aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine O-succinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T3_9ACTN
homoserine O-succinyltransferase
L3_072_000G1_scaffold_36_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14851..15447)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHR5_9ACTN
L3_072_000G1_scaffold_36_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15763..18798)
DNA (3036bp) protein (1012aa)
Peptidase M16 inactive domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNZ9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75670.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Peptidase M16C associated domain-containing protein
L3_072_000G1_scaffold_36_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19141..19632)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9Q7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75672.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_072_000G1_scaffold_36_17
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19735..20625)
DNA (891bp) protein (297aa)
HNH endonuclease n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS87_9FIRM
HNH endonuclease {ECO:0000313|EMBL:EAX47151.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
HNH endonuclease
L3_072_000G1_scaffold_36_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20861..21985
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00037121A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68004.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_000G1_scaffold_36_19
Alloscardovia omnicolens, Alloscardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22119..23492)
DNA (1374bp) protein (458aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1321816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Alloscardovia.;" source="Alloscardovia omnicolens F0580.;"
Cytosine-specific methyltransferase n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1RAX1_9BIFI
site-specific DNA methylase
L3_072_000G1_scaffold_36_20
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23523..25028
DNA (1506bp) protein (502aa)
Putative type II restriction endonuclease n=1 Tax=Bacillus cereus F837/76 RepID=G8U5F0_BACCE
putative type II restriction endonuclease
Type II restriction endonuclease {ECO:0000313|EMBL:CDM68006.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_072_000G1_scaffold_36_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25085..25771)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39591.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
traC; DNA primase
L3_072_000G1_scaffold_36_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26362..27384
DNA (1023bp) protein (341aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75676.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_36_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27534..29864
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2W5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75677.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_36_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29868..31199
DNA (1332bp) protein (444aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphoglucosamine mutase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S0_9ACTN
phosphoglucosamine mutase
L3_072_000G1_scaffold_36_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31405..32979)
DNA (1575bp) protein (525aa)
Carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq (M32) metallopeptidase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9H0_9ACTN
Carboxypeptidase Taq (M32) metallopeptidase {ECO:0000313|EMBL:CDA35480.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_072_000G1_scaffold_36_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


33485..34561
DNA (1077bp) protein (359aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9R8_9ACTN
L3_072_000G1_scaffold_36_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34725..37178
DNA (2454bp) protein (818aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9R7_9ACTN
L3_072_000G1_scaffold_36_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37505..38587
DNA (1083bp) protein (361aa)
Cobalamin biosynthesis protein CbiM n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9R6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75682.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
cobalt transport protein CbiM
L3_072_000G1_scaffold_36_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38565..39401
DNA (837bp) protein (279aa)
Cobalt transport protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9G5_9ACTN
Cobalt transport protein {ECO:0000313|EMBL:CDA35475.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
cobalt ABC transporter permease CbiQ
L3_072_000G1_scaffold_36_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

39422..40216
DNA (795bp) protein (265aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9R4_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39582.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cobalt ABC transporter ATPase
Displaying items 1-30 of 146 in total

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