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L3_072_000G1_scaffold_61

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Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_61_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

275..2956
DNA (2682bp) protein (894aa)
DEAD/DEAH box helicase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E809_9ACTN
DEAD/DEAH box helicase {ECO:0000313|EMBL:EBA40025.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
DEAD/DEAH box helicase
L3_072_000G1_scaffold_61_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3036..4793)
DNA (1758bp) protein (586aa)
Prevent-host-death family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E810_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75398.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_61_3
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4933..5709)
DNA (777bp) protein (259aa)
YdjC-like protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G900_9ACTN
YdjC-like protein {ECO:0000313|EMBL:EEA91197.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
PTS sugar transporter
L3_072_000G1_scaffold_61_4
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5775..7223)
DNA (1449bp) protein (483aa)
bglP2; PTS system beta-glucosides-specific transporter subunit IIA (EC:2.7.1.69)
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EFM26998.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFM26998.1};; TaxID=864569 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equinus ATCC 700338.;"
PTS system, beta-glucosides-specific IIA component n=1 Tax=Streptococcus gallolyticus (strain ATCC BAA-2069) RepID=F0VSP9_STRG2
L3_072_000G1_scaffold_61_5
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7564..8400)
DNA (837bp) protein (279aa)
PRD domain protein n=1 Tax=Olsenella profusa F0195 RepID=U2USB6_9ACTN
PRD domain protein {ECO:0000313|EMBL:ERL06017.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
bglG4; beta-glucoside operon antiterminator
L3_072_000G1_scaffold_61_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8474..9019)
DNA (546bp) protein (182aa)
Ser/Thr phosphatase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E813_9ACTN
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EBA40029.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
putative phosphoesterase or phosphohydrolase
L3_072_000G1_scaffold_61_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9086..9277)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6J9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35338.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_072_000G1_scaffold_61_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9530..10909)
DNA (1380bp) protein (460aa)
Aldehyde dehydrogenase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZM31_9ACTN
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
aldehyde dehydrogenase
L3_072_000G1_scaffold_61_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10918..12138)
DNA (1221bp) protein (407aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EBA40033.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EBA40033.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E817_9ACTN
alcohol dehydrogenase
L3_072_000G1_scaffold_61_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12395..12955
DNA (561bp) protein (187aa)
Rubredoxin n=2 Tax=Collinsella RepID=A4E818_9ACTN
Rubredoxin {ECO:0000313|EMBL:CDA35334.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
rubrerythrin
L3_072_000G1_scaffold_61_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13219..14346)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6J3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35333.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_072_000G1_scaffold_61_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14639..16078)
DNA (1440bp) protein (480aa)
Transcriptional regulator, GntR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E821_9ACTN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EBA40037.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator with HTH domain and aminotransferase domain
L3_072_000G1_scaffold_61_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16197..17114
DNA (918bp) protein (306aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal biosynthesis lyase PdxS n=2 Tax=Collinsella RepID=A4E822_9ACTN
L3_072_000G1_scaffold_61_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17135..17722
DNA (588bp) protein (196aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glutamine amidotransferase subunit PdxT (EC:2.6.-.-)
Glutamine amidotransferase subunit PdxT n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E823_9ACTN
L3_072_000G1_scaffold_61_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18113..19024)
DNA (912bp) protein (304aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E828_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75416.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_072_000G1_scaffold_61_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19177..20526)
DNA (1350bp) protein (450aa)
Transporter major facilitator family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIX8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75415.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
EmrB/QacA subfamily drug resistance transporter
L3_072_000G1_scaffold_61_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20798..21208
DNA (411bp) protein (137aa)
Peptide deformylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E830_9ACTN
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
N-formylmethionyl-tRNA deformylase
L3_072_000G1_scaffold_61_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21284..22804)
DNA (1521bp) protein (507aa)
Aminotransferase class I/II n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6P0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75408.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
bifunctional HTH-domain containing protein/aminotransferase
L3_072_000G1_scaffold_61_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22968..23825)
DNA (858bp) protein (286aa)
RuBisCO operon transcriptional regulator n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E832_9ACTN
RuBisCO operon transcriptional regulator {ECO:0000313|EMBL:EBA40048.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, LysR family
L3_072_000G1_scaffold_61_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23944..24855
DNA (912bp) protein (304aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E833_9ACTN
Putative membrane protein {ECO:0000313|EMBL:EBA40049.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_072_000G1_scaffold_61_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24995..27241
DNA (2247bp) protein (749aa)
Probable potassium transport system protein kup n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E834_9ACTN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
K potassium transporter
L3_072_000G1_scaffold_61_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27323..28288)
DNA (966bp) protein (322aa)
Linear amide C-N hydrolase choloylglycine hydrolase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2J0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75436.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
penicillin V acylase-like amidase
L3_072_000G1_scaffold_61_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28420..28839)
DNA (420bp) protein (140aa)
Peptide deformylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E836_9ACTN
Peptide deformylase {ECO:0000256|RuleBase:RU003335}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
formylmethionine deformylase
L3_072_000G1_scaffold_61_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29033..30343
DNA (1311bp) protein (437aa)
Putative permease n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFQ4_9ACTN
Putative permease {ECO:0000313|EMBL:CDA35389.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
xanthine/uracil/vitamin C permease
L3_072_000G1_scaffold_61_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30481..31146
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E838_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75433.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Putative esterase
L3_072_000G1_scaffold_61_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31207..32541)
DNA (1335bp) protein (445aa)
Uracil-xanthine permease n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6P9_9ACTN
Uracil-xanthine permease {ECO:0000313|EMBL:CDA35393.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
uracil-xanthine permease
L3_072_000G1_scaffold_61_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32664..33797)
DNA (1134bp) protein (378aa)
Methionine synthase vitamin-B12 independent n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFQ7_9ACTN
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:CDA35394.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Methionine synthase vitamin-B12 independent
L3_072_000G1_scaffold_61_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33953..34849)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E840_9ACTN
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EBA40056.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hydrogen peroxide-inducible genes activator
L3_072_000G1_scaffold_61_29
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34860..35768)
DNA (909bp) protein (303aa)
HAD hydrolase, family IIB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E841_9ACTN
HAD hydrolase, family IIB {ECO:0000313|EMBL:EBA40057.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Haloacid dehalogenase domain-containing protein hydrolase type 3
L3_072_000G1_scaffold_61_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36094..36933
DNA (840bp) protein (280aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Hydroxyethylthiazole kinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIM9_9ACTN
hydroxyethylthiazole kinase
Displaying items 1-30 of 133 in total

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