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L3_072_000G1_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_79_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..79)
DNA (78bp) protein (26aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TVZ7_9FIRM
hypothetical protein
NADPH-dependent FMN reductase {ECO:0000313|EMBL:CBK92309.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_072_000G1_scaffold_79_2
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(296..1708)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36279.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_3
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1717..2655)
DNA (939bp) protein (313aa)
CMP-binding protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBG9_9FIRM
CMP-binding protein {ECO:0000313|EMBL:CDE36278.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
CMP-binding protein
L3_072_000G1_scaffold_79_4
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2708..3964)
DNA (1257bp) protein (419aa)
2-alkenal reductase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDM7_9FIRM
2-alkenal reductase {ECO:0000313|EMBL:CDE36277.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
2-alkenal reductase
L3_072_000G1_scaffold_79_5
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4163..6532
DNA (2370bp) protein (790aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Endonuclease MutS2 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAF5_9FIRM
DNA mismatch repair protein MutS2
L3_072_000G1_scaffold_79_6
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6548..7252
DNA (705bp) protein (235aa)
Two-component system OmpR family response regulator ResD n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA96_9FIRM
Two-component system OmpR family response regulator ResD {ECO:0000313|EMBL:CDE36275.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
two-component system OmpR family response regulator ResD
L3_072_000G1_scaffold_79_7
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7306..8724
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Two-component system OmpR family phosphate regulon sensor histidine kinase PhoR n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9E5_9FIRM
two-component system OmpR family phosphate regulon sensor histidine kinase PhoR
L3_072_000G1_scaffold_79_8
unknown

Not on your lists

comp(8786..8953)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000G1_scaffold_79_9
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9004..10374)
DNA (1371bp) protein (457aa)
Glucan-binding domain-containing protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N6D1_SLAHD
Glucan-binding domain-containing protein {ECO:0000313|EMBL:ACV22466.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
glucan-binding domain-containing protein
L3_072_000G1_scaffold_79_10
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10531..10965)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36273.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
metallophosphoesterase
L3_072_000G1_scaffold_79_11
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10987..11487)
DNA (501bp) protein (167aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDM3_9FIRM
TrmH family RNA methyltransferase
L3_072_000G1_scaffold_79_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11570..12040)
DNA (471bp) protein (157aa)
Chemotaxis protein CheX n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAF1_9FIRM
Chemotaxis protein CheX {ECO:0000313|EMBL:CDE36271.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
chemotaxis protein CheX
L3_072_000G1_scaffold_79_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12027..13208)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36270.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_14
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13205..13687)
DNA (483bp) protein (161aa)
Lrp/AsnC family transcriptional regulator leucine-responsive regulatory protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9E1_9FIRM
Lrp/AsnC family transcriptional regulator leucine-responsive regulatory protein {ECO:0000313|EMBL:CDE36269.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
AsnC family transcriptional regulator
L3_072_000G1_scaffold_79_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13720..14697)
DNA (978bp) protein (326aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBG3_9FIRM
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:CDE36268.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hydrogenase expression/formation protein HypE
L3_072_000G1_scaffold_79_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15053..15670
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36266.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15703..16419)
DNA (717bp) protein (239aa)
DNA polymerase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA91_9FIRM
DNA polymerase {ECO:0000313|EMBL:CDE36265.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA polymerase
L3_072_000G1_scaffold_79_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16447..17076)
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Endonuclease III n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9D6_9FIRM
hypothetical protein
L3_072_000G1_scaffold_79_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17437..18165)
DNA (729bp) protein (243aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBF9_9FIRM
tRNA (guanine-N1-)-methyltransferase
L3_072_000G1_scaffold_79_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18165..19067)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36262.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19101..21215)
DNA (2115bp) protein (705aa)
Glycoside Hydrolase Family 13 candidate a-glycosidase (Amylase-related) n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAE3_9FIRM
Glycoside Hydrolase Family 13 candidate a-glycosidase (Amylase-related) {ECO:0000313|EMBL:CDE36261.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
glycoside hydrolase family 13 protein
L3_072_000G1_scaffold_79_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21524..23344)
DNA (1821bp) protein (607aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA86_9FIRM
microtubule-severing ATPase
L3_072_000G1_scaffold_79_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23416..23943)
DNA (528bp) protein (176aa)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9D1_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDE36259.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypoxanthine phosphoribosyltransferase
L3_072_000G1_scaffold_79_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23945..25459)
DNA (1515bp) protein (505aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBF6_9FIRM
cell cycle protein MesJ
L3_072_000G1_scaffold_79_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25514..26638)
DNA (1125bp) protein (375aa)
Protein phosphatase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDL4_9FIRM
Protein phosphatase {ECO:0000313|EMBL:CDE36257.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
protein phosphatase
L3_072_000G1_scaffold_79_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26731..27057)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36256.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27047..27436)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HA82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36255.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27472..27759)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36254.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27824..28063)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36253.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_072_000G1_scaffold_79_30
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28184..28459)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36252.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA-binding protein HU
Displaying items 1-30 of 144 in total

View Taxonomy