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L3_072_000G1_scaffold_80

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Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_80_1
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(473..2038)
DNA (1566bp) protein (522aa)
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R316_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ85950.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
plasmid pRiA4b ORF-3 family protein
L3_072_000G1_scaffold_80_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2427..3350
DNA (924bp) protein (308aa)
Phosphate binding protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R315_CLOSW
phosphate binding protein
Phosphate binding protein {ECO:0000313|EMBL:ADL03005.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_80_3
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3429..4364
DNA (936bp) protein (312aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R314_CLOSW
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:EXG84707.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
phosphate ABC transporter permease
L3_072_000G1_scaffold_80_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4357..5259
DNA (903bp) protein (301aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R313_CLOSW
phosphate ABC transporter permease
Phosphate ABC transporter, inner membrane subunit PstA {ECO:0000313|EMBL:ADL03003.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_80_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5262..6026
DNA (765bp) protein (255aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Phosphate ABC transporter, ATPase subunit n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R312_CLOSW
phosphate ABC transporter ATPase
L3_072_000G1_scaffold_80_6
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6062..6724
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R311_CLOSW
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
phosphate uptake regulator PhoU
L3_072_000G1_scaffold_80_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6993..8132)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AAB6_9CLOT
L3_072_000G1_scaffold_80_8
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8250..10511)
DNA (2262bp) protein (754aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R309_CLOSW
Signal transduction histidine kinase {ECO:0000313|EMBL:EXG84702.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
integral membrane sensor signal transduction histidine kinase
L3_072_000G1_scaffold_80_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10483..11196)
DNA (714bp) protein (238aa)
Two-component system response regulator VanR n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W2P4_9CLOT
Two-component system response regulator VanR {ECO:0000313|EMBL:ENY97114.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
winged helix family two component transcriptional regulator
L3_072_000G1_scaffold_80_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11444..12388)
DNA (945bp) protein (315aa)
Metal dependent phosphohydrolase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R307_CLOSW
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADL02997.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_80_11
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12435..13745)
DNA (1311bp) protein (437aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R306_CLOSW
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:EXG84699.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
PDZ/DHR/GLGF domain-containing protein
L3_072_000G1_scaffold_80_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13950..16343
DNA (2394bp) protein (798aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Endonuclease MutS2 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R305_CLOSW
MutS2 family protein
L3_072_000G1_scaffold_80_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16364..17074
DNA (711bp) protein (237aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R304_CLOSW
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EXG84697.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
winged helix family two component transcriptional regulator
L3_072_000G1_scaffold_80_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17075..18481
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R303_CLOSW
integral membrane sensor signal transduction histidine kinase
L3_072_000G1_scaffold_80_15
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18715..19554
DNA (840bp) protein (280aa)
Transcriptional antiterminator BglG n=1 Tax=Roseburia sp. CAG:45 RepID=R6P1V1_9FIRM
Transcriptional antiterminator BglG {ECO:0000313|EMBL:CDC12451.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
transcriptional antiterminator BglG
L3_072_000G1_scaffold_80_16
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19642..21558
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NMH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12450.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6)
L3_072_000G1_scaffold_80_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21629..22990)
DNA (1362bp) protein (454aa)
PhoH family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERK9_9FIRM
PhoH family protein {ECO:0000313|EMBL:EEQ60653.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted ATPase related to phosphate starvation-inducible protein PhoH
L3_072_000G1_scaffold_80_18
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23135..24232)
DNA (1098bp) protein (366aa)
GntR family transcriptional regulator, arabinose operon transcriptional repressor n=9 Tax=Clostridium RepID=N9VGA2_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:KEZ87660.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
GntR family transcriptional regulator
L3_072_000G1_scaffold_80_19
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24254..25420)
DNA (1167bp) protein (389aa)
Multiple sugar ABC transporter permease n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XCH4_9CLOT
Multiple monosaccharide ABC transporter membrane protein {ECO:0000313|EMBL:EXG85953.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC-type xylose transport system, permease component
L3_072_000G1_scaffold_80_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25423..26970)
DNA (1548bp) protein (516aa)
L-arabinose transport ATP-binding protein AraG n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5HUM9_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEZ87662.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
ABC-type sugar transport system, ATPase component
L3_072_000G1_scaffold_80_21
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27184..28362)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RZD7_9CLOT
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:EXG85951.1}; Flags: Precursor;; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
ABC-type xylose transport system, periplasmic component
L3_072_000G1_scaffold_80_22
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28739..29236)
DNA (498bp) protein (166aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W2T7_9CLOT
tRNA/rRNA methyltransferase SpoU
L3_072_000G1_scaffold_80_23
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29243..30412)
DNA (1170bp) protein (390aa)
Aminotransferase class I and II n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R301_CLOSW
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KEZ87545.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
class I and II aminotransferase
L3_072_000G1_scaffold_80_24
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30409..30891)
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R300_CLOSW
AsnC family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EXG84692.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
L3_072_000G1_scaffold_80_25
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30924..31493)
DNA (570bp) protein (190aa)
AIR synthase related protein domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Z9_CLOSW
Hydrogenase maturation factor {ECO:0000313|EMBL:EXG84691.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
AIR synthase domain-containing protein
L3_072_000G1_scaffold_80_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31503..32987)
DNA (1485bp) protein (495aa)
VanW family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Z8_CLOSW
VanW family protein
VanW family protein {ECO:0000313|EMBL:ADL02988.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_80_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33041..33151)
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Z7_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02987.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_80_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33168..33950)
DNA (783bp) protein (261aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ADL02986.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADL02986.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
DNA polymerase III, epsilon subunit n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Z6_CLOSW
L3_072_000G1_scaffold_80_29
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33893..34555)
DNA (663bp) protein (221aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Z5_CLOSW
L3_072_000G1_scaffold_80_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34525..36294)
DNA (1770bp) protein (590aa)
Radical SAM domain protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2Z4_CLOSW
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADL02984.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Displaying items 1-30 of 139 in total

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