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L3_072_000G1_scaffold_93

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Displaying items 1-30 of 157 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_93_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..600
DNA (600bp) protein (200aa)
Putative transposase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7K1_CLOPF
Putative transposase {ECO:0000313|EMBL:EDT70206.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
transposase IS116/IS110/IS902 family
L3_072_000G1_scaffold_93_2
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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1296..2018
DNA (723bp) protein (241aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 id=3717056 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
HAD family hydrolase
Tax=GWF2_Clostridiales_38_85_curated
L3_072_000G1_scaffold_93_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2096..4267
DNA (2172bp) protein (724aa)
Tex-like protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 PF5_CLOSA">RepID=U5MPF5_CLOSA
Tex-like protein {ECO:0000313|EMBL:AGX41561.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Tex-like protein
L3_072_000G1_scaffold_93_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4700..5287
DNA (588bp) protein (196aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CYJ1_CLOPF
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_072_000G1_scaffold_93_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5857..7212)
DNA (1356bp) protein (452aa)
Transcriptional regulator, GntR family/aminotransferase, classes I and II n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JNW9_CLOBU
aminotransferase class I and II family protein
Aminotransferase class I and II family protein {ECO:0000313|EMBL:AIY84475.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_93_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7384..8688
DNA (1305bp) protein (435aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:AIY85188.1}; EC=3.2.1.86 {ECO:0000313|EMBL:AIY85188.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
6-phospho-beta-glucosidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM73_9CLOT
L3_072_000G1_scaffold_93_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8740..10068
DNA (1329bp) protein (443aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
Putative PTS system, cellobiose-specific IIC component n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CV40_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_93_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10138..11031
DNA (894bp) protein (298aa)
ROK family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D4X0_CLOSO
ROK family protein
ROK family protein {ECO:0000313|EMBL:AIY84178.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_93_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11028..11765
DNA (738bp) protein (246aa)
Carbohydrate deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01246};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI00030C2F88
ydjC-like family protein
L3_072_000G1_scaffold_93_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11919..13946
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y1V1_9CLOT
SH3 domain protein
SH3 domain protein {ECO:0000313|EMBL:AIY84657.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_93_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14246..16042
DNA (1797bp) protein (599aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMC1_CLOSA
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AGX41745.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_072_000G1_scaffold_93_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16051..17790
DNA (1740bp) protein (580aa)
peptidase S8 n=1 Tax=Clostridium botulinum RepID=UPI00036692DE
Peptidase S8 {ECO:0000313|EMBL:KIL07026.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
putative spore-cortex-lytic enzyme
L3_072_000G1_scaffold_93_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17868..18704)
DNA (837bp) protein (279aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R0_9CLOT
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EEH96569.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system IID component, Man family (TC 4.A.6)
L3_072_000G1_scaffold_93_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18685..19500)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96570.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_072_000G1_scaffold_93_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19523..19999)
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH4_9CLOT
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EEH96571.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_072_000G1_scaffold_93_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20351..21517
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96572.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
AraC family transcriptional regulator
L3_072_000G1_scaffold_93_17
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21643..21921)
DNA (279bp) protein (93aa)
Preprotein translocase, YajC subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2A2_9CLOT
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KHS57532.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
preprotein translocase, YajC subunit
L3_072_000G1_scaffold_93_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21924..22355)
DNA (432bp) protein (144aa)
PTS system, mannose/fructose/sorbose family, IIA component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1R1_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EEH96574.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
PTS system fructose subfamily transporter subunit IIA
L3_072_000G1_scaffold_93_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22402..23580)
DNA (1179bp) protein (393aa)
galactosamine 6-phosphate isomerase AgaS (EC:5.-.-.-)
Sugar isomerase, AgaS family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLZ7_9CLOT
Sugar isomerase, AgaS family {ECO:0000313|EMBL:EKY28735.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L3_072_000G1_scaffold_93_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23752..24891
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C7_9CLOT
L3_072_000G1_scaffold_93_21
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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24891..25415
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DF57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95410.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L3_072_000G1_scaffold_93_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25435..26286
DNA (852bp) protein (284aa)
Class II aldolase, tagatose bisphosphate family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLB2_9CLOT
Class II aldolase, tagatose bisphosphate family {ECO:0000313|EMBL:EKY28731.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
gatY; tagatose-bisphosphate aldolase
L3_072_000G1_scaffold_93_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26446..28089)
DNA (1644bp) protein (548aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVV7_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES48550.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L3_072_000G1_scaffold_93_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28443..29273
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H292_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96543.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_072_000G1_scaffold_93_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29270..29488
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H292_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96543.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
F5/8 type C domain protein
L3_072_000G1_scaffold_93_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29485..29673
DNA (189bp) protein (63aa)
F5/8 type C domain protein
F5/8 type C domain protein {ECO:0000313|EMBL:AIY84110.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_072_000G1_scaffold_93_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29731..30264
DNA (534bp) protein (178aa)
NPCBM/NEW2 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71670.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
F5/8 type C domain protein
L3_072_000G1_scaffold_93_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30452..31435
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96496.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
UbiA prenyltransferase
L3_072_000G1_scaffold_93_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31582..31734
DNA (153bp) protein (51aa)
Conserved domain protein n=4 Tax=Clostridium botulinum RepID=B2TJT9_CLOBB
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:ACD23506.1}; Uncharacterized protein {ECO:0000313|EMBL:CDH90391.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_072_000G1_scaffold_93_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31825..31989)
DNA (165bp) protein (55aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THZ8_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24425.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Displaying items 1-30 of 157 in total

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