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L3_072_000G1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_108_1
unknown

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_072_000G1_scaffold_108_2
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(550..1353)
DNA (804bp) protein (268aa)
Lytic transglycosylase catalytic n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X1_CLOSW
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:EXG83338.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
lytic transglycosylase
L3_072_000G1_scaffold_108_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1382..2449)
DNA (1068bp) protein (356aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X2_CLOSW
cell wall binding repeat-containing protein
Putative cell wall binding repeat-containing protein {ECO:0000313|EMBL:ADL05944.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2437..3795)
DNA (1359bp) protein (453aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X3_CLOSW
cell wall binding repeat-containing protein
Putative cell wall binding repeat-containing protein {ECO:0000313|EMBL:ADL05945.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3887..4504)
DNA (618bp) protein (206aa)
Type IV pilus assembly PilZ n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X4_CLOSW
type IV pilus assembly PilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:ADL05946.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4509..4856)
DNA (348bp) protein (116aa)
Type III secretion exporter n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X5_CLOSW
type III secretion exporter
Type III secretion exporter {ECO:0000313|EMBL:ADL05947.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_7
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4843..6264)
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X6_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG83343.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_108_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6391..8523
DNA (2133bp) protein (711aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
CheA signal transduction histidine kinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X7_CLOSW
chemotaxis protein CheA
L3_072_000G1_scaffold_108_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8544..9002
DNA (459bp) protein (153aa)
CheW protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X8_CLOSW
chemotaxis protein CheW
CheW protein {ECO:0000313|EMBL:ADL05950.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9017..9829
DNA (813bp) protein (271aa)
chemotaxis protein CheR (EC:2.1.1.80)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ADL05951.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ADL05951.1};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
MCP methyltransferase, CheR-type n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9X9_CLOSW
L3_072_000G1_scaffold_108_11
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9974..11014
DNA (1041bp) protein (347aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y0_CLOSW
L3_072_000G1_scaffold_108_12
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11113..11424
DNA (312bp) protein (104aa)
Anti-sigma-28 factor, FlgM n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y1_CLOSW
Negative regulator of flagellin synthesis (Anti-sigma28 factor) {ECO:0000313|EMBL:EXG83348.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
anti-sigma-28 factor FlgM
L3_072_000G1_scaffold_108_13
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11430..11855
DNA (426bp) protein (142aa)
FlgN family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y2_CLOSW
FlgN protein {ECO:0000313|EMBL:EXG83349.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
FlgN family protein
L3_072_000G1_scaffold_108_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11852..13891
DNA (2040bp) protein (680aa)
Flagellar hook-associated protein FlgK n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y3_CLOSW
Flagellar hook-associated protein {ECO:0000313|EMBL:EXG83350.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
flagellar hook-associated protein FlgK
L3_072_000G1_scaffold_108_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13903..14913
DNA (1011bp) protein (337aa)
Flagellin and related hook-associated protein-like protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y4_CLOSW
Flagellin/flagellar hook associated protein {ECO:0000313|EMBL:EXG83351.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Flagellin and related hook-associated protein-like protein
L3_072_000G1_scaffold_108_16
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14936..15544
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y5_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:EXG83352.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_108_17
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15564..16010
DNA (447bp) protein (149aa)
Flagellar assembly factor FliW n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y6_CLOSW
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L3_072_000G1_scaffold_108_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16012..16263
DNA (252bp) protein (84aa)
Carbon storage regulator, CsrA n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y7_CLOSW
carbon storage regulator CsrA
Carbon storage regulator, CsrA {ECO:0000313|EMBL:ADL05959.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16266..17594)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y8_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05960.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17798..18586
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Y9_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL05961.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_21
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18578..18982)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z0_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ88116.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_072_000G1_scaffold_108_22
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19048..19416)
DNA (369bp) protein (123aa)
Flagellar protein FliS n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z1_CLOSW
Flagellar biosynthetic protein FliS {ECO:0000313|EMBL:EXG83358.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
flagellar protein FliS
L3_072_000G1_scaffold_108_23
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19434..21782)
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MFT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEZ88114.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
Flagellar capping protein
L3_072_000G1_scaffold_108_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21922..22695
DNA (774bp) protein (258aa)
ParA family protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z3_CLOSW
ParA family protein
ParA family protein {ECO:0000313|EMBL:ADL05965.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22720..23940
DNA (1221bp) protein (407aa)
Late competence development protein ComFB n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z4_CLOSW
late competence development protein ComFB
Late competence development protein ComFB {ECO:0000313|EMBL:ADL05966.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23937..25220)
DNA (1284bp) protein (428aa)
Diguanylate phosphodiesterase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z5_CLOSW
diguanylate phosphodiesterase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ADL05967.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25222..26133)
DNA (912bp) protein (304aa)
Response regulator receiver modulated CheW protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z6_CLOSW
response regulator receiver modulated CheW protein
Response regulator receiver modulated CheW protein {ECO:0000313|EMBL:ADL05968.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000G1_scaffold_108_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26217..26699)
DNA (483bp) protein (161aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z7_CLOSW
chemotaxis protein CheD
L3_072_000G1_scaffold_108_29
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26692..27318)
DNA (627bp) protein (209aa)
CheC, inhibitor of MCP methylation n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z8_CLOSW
Chemotaxis protein CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EXG83365.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
chemotaxis protein CheC
L3_072_000G1_scaffold_108_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27352..28125)
DNA (774bp) protein (258aa)
Fagellar hook-basal body protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R9Z9_CLOSW
fagellar hook-basal body protein
Fagellar hook-basal body protein {ECO:0000313|EMBL:ADL05971.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
Displaying items 1-30 of 117 in total

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