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L3_072_000G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_112_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

225..464
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus ATCC 21052 RepID=G6ASM0_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN79521.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L3_072_000G1_scaffold_112_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

568..1614
DNA (1047bp) protein (349aa)
Conserved membrane protein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEJ2_LACRG
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79520.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_112_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1779..2876)
DNA (1098bp) protein (366aa)
Beta-lactamase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEJ3_LACRG
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:BAI42585.1}; Beta-lactamase class C related penicillin binding protein {ECO:0000313|EMBL:CAR88036.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2866..3942)
DNA (1077bp) protein (359aa)
Permease n=9 Tax=Lactobacillus rhamnosus RepID=C7TEJ4_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74834.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4033..4734)
DNA (702bp) protein (234aa)
Sortase (Surface protein transpeptidase) n=9 Tax=Lactobacillus rhamnosus RepID=B5QKU2_LACRH
sortase
Sortase A, LPXTG specific {ECO:0000313|EMBL:EKS53354.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_112_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5032..5442
DNA (411bp) protein (137aa)
Cell wall teichoic acid glycosylation protein gtcA n=6 Tax=Lactobacillus rhamnosus RepID=C7TEJ6_LACRG
hypothetical protein
Cell wall teichoic acid glycosylation protein gtcA {ECO:0000313|EMBL:CAR88039.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42588.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5534..7297)
DNA (1764bp) protein (588aa)
Pyruvate oxidase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEJ7_LACRG
pyruvate oxidase
Pyruvate oxidase {ECO:0000313|EMBL:BAI42589.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7480..8382)
DNA (903bp) protein (301aa)
ABC transporter, glycine/betaine/carnitine substrate-binding lipoprotein n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEJ8_LACRG
glycine/betaine/carnitine ABC transporter substrate binding component
ABC transporter, glycine/betaine/carnitine substrate-binding lipoprotein {ECO:0000313|EMBL:CAR88041.1}; Glycine/betaine/carnitine ABC transporter substrate binding component {ECO:0000313|EMBL:BAI42590.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8394..9245)
DNA (852bp) protein (284aa)
ABC transporter, binding-protein-dependent transporter permeasecomponent n=8 Tax=Lactobacillus rhamnosus RepID=C7TEJ9_LACRG
proW; ABC transporter permease
Glycine betaine ABC transport system permease protein OpuAB {ECO:0000313|EMBL:EKS53358.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_072_000G1_scaffold_112_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9238..10461)
DNA (1224bp) protein (408aa)
ABC transporter, glycine betaine/L-proline transporter ATP-binding protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TEK0_LACRG
proV; glycine/betaine/L-proline ABC transporter ATP-binding protein
ABC transporter, glycine betaine/L-proline transporter ATP-binding protein {ECO:0000313|EMBL:CAR88043.1}; Glycine/betaine/carnitine ABC transporter ATP-binding component {ECO:0000313|EMBL:BAI42592.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10814..11545)
DNA (732bp) protein (244aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEK1_LACRG
hypothetical protein
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11879..12340)
DNA (462bp) protein (154aa)
Universal stress protein UspA related nucleotide-binding protein n=2 Tax=Lactobacillus rhamnosus RepID=B5QKT5_LACRH
usp; UspA family universal stress protein
Nucleotide-binding protein {ECO:0000313|EMBL:BAI42595.1}; Universal stress protein, UspA family {ECO:0000313|EMBL:CAR88046.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12389..13648)
DNA (1260bp) protein (420aa)
Predicted ATP-grasp enzyme n=2 Tax=Lactobacillus rhamnosus RepID=B5QKT4_LACRH
hypothetical protein
ATP-grasp enzyme {ECO:0000313|EMBL:CAR88047.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI42596.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13930..14808)
DNA (879bp) protein (293aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
Homoserine kinase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEK5_LACRG
homoserine kinase
L3_072_000G1_scaffold_112_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14774..16288)
DNA (1515bp) protein (505aa)
Threonine synthase n=1 Tax=Lactobacillus rhamnosus (strain ATCC 53103 / GG) RepID=C7TEK6_LACRG
threonine synthase
Threonine synthase {ECO:0000313|EMBL:BAI42598.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_072_000G1_scaffold_112_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16396..17595
DNA (1200bp) protein (400aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Homoserine dehydrogenase n=5 Tax=Lactobacillus rhamnosus RepID=C7TLB7_LACRL
homoserine dehydrogenase family protein
L3_072_000G1_scaffold_112_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17592..18938
DNA (1347bp) protein (449aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Aspartokinase n=8 Tax=Lactobacillus rhamnosus RepID=C7TLB8_LACRL
aspartate kinase domain protein
L3_072_000G1_scaffold_112_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19064..20596)
DNA (1533bp) protein (511aa)
Membrane protease subunit, stomatin/prohibitin family protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLB9_LACRL
hypothetical protein
Inner membrane protein YqiK {ECO:0000313|EMBL:AGP74849.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20580..20993)
DNA (414bp) protein (138aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TLC0_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79501.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_072_000G1_scaffold_112_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21222..22265)
DNA (1044bp) protein (348aa)
Conserved membrane spanning protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TLC1_LACRL
pfoSR; membrane spanning protein
Membrane protein {ECO:0000313|EMBL:KIC98567.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_112_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22279..23271)
DNA (993bp) protein (331aa)
D-2-hydroxyacid dehydrogenase n=6 Tax=Lactobacillus rhamnosus RepID=C7TLC2_LACRL
D-lactate dehydrogenase
D-lactate dehydrogenase {ECO:0000313|EMBL:AGP74852.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23320..24483)
DNA (1164bp) protein (388aa)
Aspartate/tyrosine/aromatic aminotransferase n=5 Tax=Lactobacillus rhamnosus RepID=C7TLC3_LACRL
aminotransferase class I and II family protein
Aromatic amino acid aminotransferase gamma/N-acetyl-L,L-diaminopimelate aminotransferase {ECO:0000313|EMBL:AGP74853.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24911..25645
DNA (735bp) protein (245aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=S5A5A1_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74854.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25666..26454
DNA (789bp) protein (263aa)
Alpha/beta superfamily hydrolase n=5 Tax=Lactobacillus rhamnosus RepID=C7TLC5_LACRL
alpha/beta superfamily hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:KIC98477.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_112_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26514..27104)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=7 Tax=Lactobacillus rhamnosus RepID=C7TLC6_LACRL
Transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGP74856.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27312..28838
DNA (1527bp) protein (509aa)
Phage-related infection protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLC7_LACRL
YhgE/Pip domain protein {ECO:0000313|EMBL:EEN79494.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
yhgE/Pip N-terminal domain protein
L3_072_000G1_scaffold_112_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29095..30039
DNA (945bp) protein (315aa)
Cation diffusion facilitator transporter family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UXB2_LACRH
cation diffusion facilitator transporter family protein
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:AGP74858.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_072_000G1_scaffold_112_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30152..32056)
DNA (1905bp) protein (635aa)
Asparagine synthetase n=11 Tax=Lactobacillus rhamnosus RepID=B5QKR8_LACRH
Asparagine synthetase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AGP74859.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
asnB; asparagine synthase
L3_072_000G1_scaffold_112_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32182..32487)
DNA (306bp) protein (102aa)
Alpha-galactosidase n=3 Tax=Lactobacillus rhamnosus RepID=S5A3G2_LACRH
Alpha-galactosidase
Uncharacterized protein {ECO:0000313|EMBL:KIC98481.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_072_000G1_scaffold_112_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33076..34140)
DNA (1065bp) protein (355aa)
Calcineurin-like phosphoesterase family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7UXB5_LACRH
calcineurin-like phosphoesterase family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74862.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 110 in total

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