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L3_072_000G1_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_125_1
unknown

Not on your lists

97..294
DNA (198bp) protein (66aa)

This feature has no annotations

L3_072_000G1_scaffold_125_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1774..2613
DNA (840bp) protein (280aa)
Uncharacterized protein n=204 Tax=Clostridium difficile RepID=Q18CK0_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28972.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_125_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2610..3791
DNA (1182bp) protein (394aa)
YbbR-like family protein n=24 Tax=Clostridium difficile RepID=T2TR32_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28973.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_125_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4095..4997
DNA (903bp) protein (301aa)
phosphate butyryltransferase (EC:2.3.1.19)
Phosphate butyryltransferase {ECO:0000313|EMBL:CCK97949.1}; EC=2.3.1.19 {ECO:0000313|EMBL:CCK97949.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Phosphate butyryltransferase n=207 Tax=Clostridium difficile RepID=C9XIN4_CLODC
L3_072_000G1_scaffold_125_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5019..6098
DNA (1080bp) protein (360aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:0000256|HAMAP-Rule:MF_00542}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Probable butyrate kinase n=1 Tax=Clostridium difficile P51 RepID=T4S3X7_CLODI
buk; butyrate kinase
L3_072_000G1_scaffold_125_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6088..6765
DNA (678bp) protein (226aa)
Uncharacterized protein n=211 Tax=Clostridium difficile RepID=Q18CK2_CLOD6
ATP/GTP-binding protein
Putative exopolyphosphatase {ECO:0000313|EMBL:EQG78606.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_072_000G1_scaffold_125_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6808..7023
DNA (216bp) protein (72aa)
4Fe-4S binding domain protein n=212 Tax=Clostridium difficile RepID=C9XIN7_CLODC
ferredoxin
Putative 4Fe-4S ferredoxin, iron-sulfur binding domain protein, delta subunit {ECO:0000313|EMBL:CCK90477.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
L3_072_000G1_scaffold_125_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7052..8131
DNA (1080bp) protein (360aa)
Putative ferredoxin/flavodoxin oxidoreductase,alpha subunit {ECO:0000313|EMBL:CAJ66936.1}; EC=1.2.7.- {ECO:0000313|EMBL:CAJ66936.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
3-methyl-2-oxobutanoate dehydrogenase n=198 Tax=Clostridium difficile RepID=G6BHP5_CLODI
2-ketoisovalerate ferredoxin reductase
L3_072_000G1_scaffold_125_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8131..8883
DNA (753bp) protein (251aa)
Putative ferredoxin/flavodoxin oxidoreductase,beta subunit {ECO:0000313|EMBL:CCK94051.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCK94051.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=219 Tax=Clostridium difficile RepID=D5Q951_CLODI
subunit of oxidoreductase
L3_072_000G1_scaffold_125_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8884..9441
DNA (558bp) protein (186aa)
Putative ferredoxin/flavodoxin oxidoreductase,gamma subunit {ECO:0000313|EMBL:CCL21016.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL21016.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family protein n=213 Tax=Clostridium difficile RepID=C9XIP0_CLODC
subunit of oxidoreductase
L3_072_000G1_scaffold_125_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9593..10957
DNA (1365bp) protein (455aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Phosphoglucosamine mutase n=3 Tax=Clostridium difficile RepID=G6BQR8_CLODI
phosphoglucomutase/phosphomannomutase mutase
L3_072_000G1_scaffold_125_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11224..13056
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=14 Tax=Clostridium difficile RepID=C9XIP2_CLODC
glmS; glucosamine--fructose-6-phosphate aminotransferase
L3_072_000G1_scaffold_125_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13507..14802
DNA (1296bp) protein (432aa)
putative thiosulfate sulfurtransferase (EC:2.8.1.1)
Rhodanese-like domain protein n=2 Tax=Clostridium difficile RepID=T4Q166_CLODI
Rhodanese-like domain protein {ECO:0000313|EMBL:EQE70575.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_125_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15230..15967
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P42 RepID=T4Q1F1_CLODI
hypothetical protein
Putative exported protein {ECO:0000313|EMBL:CCL29055.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_125_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15988..17241
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=216 Tax=Clostridium difficile RepID=C9XIP5_CLODC
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_072_000G1_scaffold_125_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17328..18392
DNA (1065bp) protein (355aa)
Stage II sporulation protein D n=153 Tax=Clostridium difficile RepID=T3IQ89_CLODC
spoIID; Stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:CCL21082.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_072_000G1_scaffold_125_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18458..19126
DNA (669bp) protein (223aa)
Peptidase M23 family protein n=128 Tax=Clostridium difficile RepID=T3ILU3_CLODC
putative cell wall endopeptidase
Putative cell wall endopeptidase {ECO:0000313|EMBL:CAJ66945.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_072_000G1_scaffold_125_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19254..19484
DNA (231bp) protein (77aa)
Sporulation transcriptional regulator SpoIIID n=113 Tax=Clostridium difficile RepID=T3IK83_CLODC
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EQI95177.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
spoIIID; stage III sporulation protein D
L3_072_000G1_scaffold_125_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19681..20700
DNA (1020bp) protein (340aa)
Cell shape determining , MreB/Mrl family protein n=178 Tax=Clostridium difficile RepID=C9XIP9_CLODC
mreB1; rod shape-determining protein Mbl
Rod shape-determining protein MreB {ECO:0000313|EMBL:EHJ29857.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_072_000G1_scaffold_125_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20716..21144
DNA (429bp) protein (143aa)
fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein]dehy dratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; Short=(3R)-hydroxymyristoyl-ACP dehydrase {ECO:0000255|HAMAP-Rule:MF_00406};; Beta-hydroxyacyl-ACP dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=149 Tax=Clostridium difficile RepID=FABZ_CLOD6
L3_072_000G1_scaffold_125_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21255..21773)
DNA (519bp) protein (173aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=C9XIQ1_CLODC
hypothetical protein
Putative sporulation protein YyaC {ECO:0000313|EMBL:EHJ29859.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_072_000G1_scaffold_125_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22193..23386
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
S-adenosylmethionine synthase n=172 Tax=Clostridium difficile RepID=METK_CLOD6
S-adenosylmethionine synthetase
L3_072_000G1_scaffold_125_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23702..24799
DNA (1098bp) protein (366aa)
Uncharacterized protein n=136 Tax=Clostridium difficile RepID=G6B303_CLODI
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34759.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_000G1_scaffold_125_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25063..27282
DNA (2220bp) protein (740aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Helicase, RecD/TraA family n=95 Tax=Clostridium difficile RepID=G6BQT1_CLODI
DNA-binding protein
L3_072_000G1_scaffold_125_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27285..28067
DNA (783bp) protein (261aa)
ComF family protein n=133 Tax=Clostridium difficile RepID=G6BHR2_CLODI
phosphoribosyl transferase
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EQE70582.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_125_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28399..30312
DNA (1914bp) protein (638aa)
PRD domain protein n=2 Tax=Clostridium difficile RepID=T3H8R5_CLODI
Putative transcription antiterminator {ECO:0000313|EMBL:CBE01693.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
transcription antiterminator
L3_072_000G1_scaffold_125_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30453..30761
DNA (309bp) protein (103aa)
PTS system, IIa component n=218 Tax=Clostridium difficile RepID=C9XIQ7_CLODC
PTS system transporter subunit IIA
PTS system, lactose/cellobiose-family IIA component {ECO:0000313|EMBL:CCL29068.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_072_000G1_scaffold_125_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30785..31111
DNA (327bp) protein (109aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=2 Tax=Clostridium difficile RepID=T4Q181_CLODI
PTS system transporter subunit IIB
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EHJ34754.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_072_000G1_scaffold_125_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31150..32484
DNA (1335bp) protein (445aa)
PTS system, cellobiose-specific IIC component n=112 Tax=Clostridium difficile RepID=G6BHR6_CLODI
PTS system transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_072_000G1_scaffold_125_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32495..33013
DNA (519bp) protein (173aa)
Glycine/sarcosine/betaine reductase B n=95 Tax=Clostridium difficile RepID=G6BQT7_CLODI
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein {ECO:0000313|EMBL:EQE70599.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
Displaying items 1-30 of 102 in total

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