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L3_072_000G1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000G1_scaffold_132_1
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..286
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M0F9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN09320.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_072_000G1_scaffold_132_2
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(916..2040)
DNA (1125bp) protein (375aa)
DNA protecting protein DprA n=2 Tax=Bacteroides RepID=I9EEE8_9BACE
DNA protecting protein DprA {ECO:0000313|EMBL:CCZ73849.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA protecting protein DprA
L3_072_000G1_scaffold_132_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2037..2438)
DNA (402bp) protein (134aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Bacteroides RepID=A5ZEJ0_9BACE
YbgC/YbaW family acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EIY18348.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
conserved hypothetical protein TIGR00051
L3_072_000G1_scaffold_132_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2476..3765)
DNA (1290bp) protein (430aa)
Peptidase, U32 family {ECO:0000313|EMBL:EDM21357.1}; EC=3.4.-.- {ECO:0000313|EMBL:EDM21357.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
collagenase. Unknown type peptidase. MEROPS family U32 (EC:3.4.-.-)
Peptidase, U32 family n=3 Tax=Bacteroides RepID=A5ZEJ1_9BACE
L3_072_000G1_scaffold_132_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3890..4885
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
tRNA-dihydrouridine synthase n=2 Tax=Bacteroides RepID=I9PPA1_9BACE
tRNA-U20-dihydrouridine synthase
L3_072_000G1_scaffold_132_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4941..5906)
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8UVZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18345.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
PAP2 superfamily.
L3_072_000G1_scaffold_132_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5897..6904)
DNA (1008bp) protein (336aa)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bacteroides RepID=A5ZEJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73854.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
NAD-dependent epimerase/dehydratase
L3_072_000G1_scaffold_132_8
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7094..7228
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9PPW2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73855.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000G1_scaffold_132_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7254..9410
DNA (2157bp) protein (719aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=3 Tax=Bacteroides RepID=A5ZEJ5_9BACE
L3_072_000G1_scaffold_132_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9442..9921
DNA (480bp) protein (160aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEJ6_9BACE
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EDM21362.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Predicted flavin-nucleotide-binding protein
L3_072_000G1_scaffold_132_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9924..12284
DNA (2361bp) protein (787aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 C-terminal domain protein n=2 Tax=Bacteroides caccae RepID=A5ZEJ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18340.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_072_000G1_scaffold_132_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12414..14180)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EEE2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18339.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_072_000G1_scaffold_132_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14272..15219)
DNA (948bp) protein (316aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Bacteroides caccae CAG:21 RepID=R5U744_9BACE
L3_072_000G1_scaffold_132_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15323..15661)
DNA (339bp) protein (113aa)
Cupin domain protein n=3 Tax=Bacteroides RepID=A5ZEK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18337.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
pectin degradation protein
L3_072_000G1_scaffold_132_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15863..17284
DNA (1422bp) protein (474aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZEK1_9BACE
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EDM21367.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Dienelactone hydrolase and related enzymes
L3_072_000G1_scaffold_132_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17492..18634
DNA (1143bp) protein (381aa)
Transporter, major facilitator family protein n=3 Tax=Bacteroides RepID=A5ZEK2_9BACE
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDM21368.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Arabinose efflux permease
L3_072_000G1_scaffold_132_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18909..19010
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZEK3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21369.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_072_000G1_scaffold_132_18
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19067..22507
DNA (3441bp) protein (1147aa)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UYW7_9BACE
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:CCZ73897.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
proline dehydrogenase
L3_072_000G1_scaffold_132_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22744..23847
DNA (1104bp) protein (368aa)
Ribosome-binding ATPase YchF n=3 Tax=Bacteroides RepID=A5ZEK5_9BACE
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ychF; GTP-dependent nucleic acid-binding protein EngD
L3_072_000G1_scaffold_132_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23890..24801
DNA (912bp) protein (304aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
2-dehydropantoate 2-reductase n=3 Tax=Bacteroides RepID=A5ZEK6_9BACE
oxidoreductase
L3_072_000G1_scaffold_132_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24830..25672
DNA (843bp) protein (281aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Prolipoprotein diacylglyceryl transferase n=3 Tax=Bacteroides RepID=A5ZEK7_9BACE
prolipoprotein diacylglyceryl transferase
L3_072_000G1_scaffold_132_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25813..28431)
DNA (2619bp) protein (873aa)
DNA mismatch repair protein MutS n=1 Tax=Bacteroides caccae CAG:21 RepID=R5URX9_9BACE
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
DNA mismatch repair protein MutS
L3_072_000G1_scaffold_132_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28726..30756)
DNA (2031bp) protein (677aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Bacteria RepID=A5ZEK9_9BACE
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDM21375.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
beta-galactosidase
L3_072_000G1_scaffold_132_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30787..31710)
DNA (924bp) protein (308aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDM21376.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDM21376.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=A5ZEL0_9BACE
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
L3_072_000G1_scaffold_132_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31783..31905)
DNA (123bp) protein (41aa)
Glycosyl hydrolase, family 88 n=3 Tax=Bacteroides RepID=A5ZEL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72406.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_072_000G1_scaffold_132_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32134..33990)
DNA (1857bp) protein (619aa)
SusD family protein n=3 Tax=root RepID=A5ZEL1_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21377.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RagB/SusD domain-containing protein
L3_072_000G1_scaffold_132_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34004..37366)
DNA (3363bp) protein (1121aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides caccae RepID=A5ZEL2_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY18324.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent receptor plug
L3_072_000G1_scaffold_132_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37614..38684)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PPU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY18323.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
anti-FecI sigma factor, FecR
L3_072_000G1_scaffold_132_29
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38794..39369
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor expansion family 1 n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UUM3_9BACE
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CCZ72412.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_072_000G1_scaffold_132_30
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39400..40275)
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9PP85_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72413.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
Displaying items 1-30 of 116 in total

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